System identification of signaling dependent gene expression with different time-scale data. - Takaho Tsuchiya; Masashi Fujii; Naoki Matsuda; Katsuyuki Kunida; Shinsuke Uda; Hiroyuki Kubota; Katsumi Konishi; Shinya Kuroda (PLoS Comput. Biol., 2017)

CCPLS reveals cell-type-specific spatial dependence of transcriptomes in single cells. - Takaho Tsuchiya; Hiroki Hori; Haruka Ozaki (Bioinform., 2022)