N-Terminus of the Third PDZ Domain of PSD-95 Orchestrates Allosteric Communication for Selective Ligand Binding. - Tandac F. Guclu; Nazli Kocatug; Ali Rana Atilgan; Canan Atilgan (J. Chem. Inf. Model., 2021)

Kinetic Barrier to Enzyme Inhibition Is Manipulated by Dynamical Local Interactions in E. coli DHFR. - Ebru Çetin; Tandac F. Guclu; Isik Kantarcioglu; Ilona K. Gaszek; Erdal Toprak; Ali Rana Atilgan; Burcu Dedeoglu; Canan Atilgan (J. Chem. Inf. Model., 2023)

High Throughput Mutational Scanning of a Protein via Alchemistry on a High-Performance Computing Resource. - Tandac F. Guclu; Busra Tayhan; Ebru Çetin; Ali Rana Atilgan; Canan Atilgan (Concurr. Comput. Pract. Exp., 2025)