NONCODE v2.0: decoding the non-coding. - Shunmin He; Changning Liu; Geir Skogerbø; Haitao Zhao; Jie Wang; Tao Liu 022; Baoyan Bai; Yi Zhao 013; Runsheng Chen (Nucleic Acids Res., 2008)

CEAS: cis-regulatory element annotation system. - Hyunjin Shin; Tao Liu 022; Arjun K. Manrai; Xiaole Shirley Liu (Bioinform., 2009)

CistromeMap: a knowledgebase and web server for ChIP-Seq and DNase-Seq studies in mouse and human. - Bo Qin; Meng Zhou; Ying Ge; Len Taing; Tao Liu 022; Qian Wang; Su Wang; Junsheng Chen; Lingling Shen; Xikun Duan; Sheng'en Hu; Wei Li 036; et al. (Bioinform., 2012)

CistromeFinder for ChIP-seq and DNase-seq data reuse. - Hanfei Sun; Bo Qin; Tao Liu 022; Qixuan Wang; Jing Liu; Juan Wang; Xueqiu Lin; Yulin Yang; Len Taing; Prakash K. Rao; Myles Brown; Yong Zhang 006; et al. (Bioinform., 2013)

Practical Guidelines for the Comprehensive Analysis of ChIP-seq Data. - Timothy Bailey; Pawel Krajewski; Istvan Ladunga; Céline Lefebvre; Qunhua Li; Tao Liu 022; Pedro Madrigal; Cenny Taslim; Jie Zhang (PLoS Comput. Biol., 2013)

Computational methodology for ChIP-seq analysis. - Hyunjin Shin; Tao Liu 022; Xikun Duan; Yong Zhang 006; Xiaole Shirley Liu (Quant. Biol., 2013)

Comparative analysis of metazoan chromatin organization Open. - Joshua Wing Kei Ho; Youngsook L. Jung; Tao Liu 022; Burak Han Alver; Soohyun Lee; Kohta Ikegami; Kyung-Ah Sohn; Aki Minoda; Michael Y. Tolstorukov; Alex Appert; Stephen C. J. Parker; Tingting Gu; et al. (Nat., 2014)

ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline. - Qian Qin; Shenglin Mei; Qiu Wu; Hanfei Sun; Lewyn Li; Len Taing; Sujun Chen; Fugen Li; Tao Liu 022; Chongzhi Zang; Han Xu; Yiwen Chen; et al. (BMC Bioinform., 2016)

Cistrome Data Browser: a data portal for ChIP-Seq and chromatin accessibility data in human and mouse. - Shenglin Mei; Qian Qin; Qiu Wu; Hanfei Sun; Rongbin Zheng; Chongzhi Zang; Muyuan Zhu; Jiaxin Wu; Xiaohui Shi; Len Taing; Tao Liu 022; Myles Brown; et al. (Nucleic Acids Res., 2017)