Connecting rules from paired miRNA and mRNA expression data sets of HCV patients to detect both inverse and positive regulatory relationships. - Renhua Song; Qian Liu 014; Tao Liu 031; Jinyan Li 001 (BMC Genom., 2015)

Recognition of CRISPR/Cas9 off-target sites through ensemble learning of uneven mismatch distributions. - Hui Peng; Yi Zheng 002; Zhixun Zhao; Tao Liu 031; Jinyan Li 001 (Bioinform., 2018)

Sequencing dropout-and-batch effect normalization for single-cell mRNA profiles: a survey and comparative analysis. - Tian Lan; Gyorgy Hutvagner; Qing Lan; Tao Liu 031; Jinyan Li 001 (Briefings Bioinform., 2021)

Generating mutants of monotone affinity towards stronger protein complexes through adversarial learning. - Tian Lan; Shuquan Su; Pengyao Ping; Gyorgy Hutvagner; Tao Liu 031; Yi Pan 001; Jinyan Li 001 (Nat. Mac. Intell., 2024)