An Integer Linear Programming Solution for the Most Parsimonious Reconciliation Problem under the Duplication-Loss-Coalescence Model. - Morgan Carothers; Joseph Gardi; Gianluca Gross; Tatsuki Kuze; Nuo Liu; Fiona Plunkett; Julia Qian; Yi-Chieh Wu (BCB, 2020)

"My Very Subjective Human Interpretation": Domain Expert Perspectives on Navigating the Text Analysis Loop for Topic Models. - Alexandra Schofield; Siqi Wu; Theo Bayard de Volo; Tatsuki Kuze; Alfredo Gomez; Sharifa Sultana (Proc. ACM Hum. Comput. Interact., 2025)