Virtual Grid Engine: Accelerating thousands of omics sample analyses using large-scale supercomputers. - Satoshi Ito; Masaaki Yadome; Tatsuo Nishiki; Shigeru Ishiduki; Hikaru Inoue; Rui Yamaguchi; Satoru Miyano (BIBM, 2018)

Virtual Grid Engine: a simulated grid engine environment for large-scale supercomputers. - Satoshi Ito; Masaaki Yadome; Tatsuo Nishiki; Shigeru Ishiduki; Hikaru Inoue; Rui Yamaguchi; Satoru Miyano (BMC Bioinform., 2019)

A 1024-member ensemble data assimilation with 3.5-km mesh global weather simulations. - Hisashi Yashiro; Koji Terasaki; Yuta Kawai; Shuhei Kudo; Takemasa Miyoshi; Toshiyuki Imamura; Kazuo Minami; Hikaru Inoue; Tatsuo Nishiki; Takayuki Saji; Masaki Satoh; Hirofumi Tomita (SC, 2020)

Fast scalable implicit solver with convergence of equation-based modeling and data-driven learning: earthquake city simulation on low-order unstructured finite element. - Tsuyoshi Ichimura; Kohei Fujita; Kentaro Koyama; Yuma Kikuchi; Ryota Kusakabe; Kazuo Minami; Hikaru Inoue; Seiya Nishizawa; Miwako Tsuji; Tatsuo Nishiki; Muneo Hori; Lalith Maddegedara; et al. (PASC, 2021)

New parallel computing algorithm of molecular dynamics for extremely huge scale biological systems. - Jaewoon Jung; Chigusa Kobayashi; Kento Kasahara; Cheng Tan 004; Akiyoshi Kuroda; Kazuo Minami; Shigeru Ishiduki; Tatsuo Nishiki; Hikaru Inoue; Yutaka Ishikawa; Michael Feig; Yuji Sugita (J. Comput. Chem., 2021)

High-fidelity nonlinear low-order unstructured implicit finite-element seismic simulation of important structures by accelerated element-by-element method. - Kohei Fujita; Kentaro Koyama; Kazuo Minami; Hikaru Inoue; Seiya Nishizawa; Miwako Tsuji; Tatsuo Nishiki; Tsuyoshi Ichimura; Muneo Hori; Lalith Maddegedara (J. Comput. Sci., 2021)

152K-computer-node parallel scalable implicit solver for dynamic nonlinear earthquake simulation. - Tsuyoshi Ichimura; Kohei Fujita; Kentaro Koyama; Ryota Kusakabe; Yuma Kikuchi; Takane Hori; Muneo Hori; Lalith Maddegedara; Noriyuki Ohi; Tatsuo Nishiki; Hikaru Inoue; Kazuo Minami; et al. (HPC Asia, 2022)