Ranking viruses: measures of positional importance within networks define core viruses for rational polyvalent vaccine development. - Tavis K. Anderson; William W. Laegreid; Francesco Cerutti; Fernando A. Osorio; Eric A. Nelson; Jane Christopher-Hennings; Tony L. Goldberg (Bioinform., 2012)

Influenza Research Database: An integrated bioinformatics resource for influenza virus research. - Yun Zhang 021; Brian D. Aevermann; Tavis K. Anderson; David F. Burke; Gwenaelle Dauphin; Zhiping Gu; Sherry He; Sanjeev Kumar; Christopher N. Larsen; Alexandra J. Lee; Xiaomei Li; Catherine Macken; et al. (Nucleic Acids Res., 2017)

ISU FLUture: a veterinary diagnostic laboratory web-based platform to monitor the temporal genetic patterns of Influenza A virus in swine. - Michael A. Zeller; Tavis K. Anderson; Rasna W Walia; Amy L. Vincent; Phillip C. Gauger (BMC Bioinform., 2018)

Robinson-Foulds Reticulation Networks. - Alexey Markin; Tavis K. Anderson; Venkata Sai Krishna Teja Vadali; Oliver Eulenstein (BCB, 2019)

Tripal, a community update after 10 years of supporting open source, standards-based genetic, genomic and breeding databases. - Margaret Staton; Ethalinda Cannon; Lacey-Anne Sanderson; Jill L. Wegrzyn; Tavis K. Anderson; Sean Buehler; Irene Cobo-Simón; Kay Faaberg; Emily S. Grau; Valentin Guignon; Jessica Gunoskey; Blake Inderski; et al. (Briefings Bioinform., 2021)

The United States Swine Pathogen Database: integrating veterinary diagnostic laboratory sequence data to monitor emerging pathogens of swine. - Tavis K. Anderson; Blake Inderski; Diego G. Diel; Benjamin M. Hause; Elizabeth G. Porter; Travis Clement; Eric A. Nelson; Jianfa Bai; Jane Christopher-Hennings; Phillip C. Gauger; Jianqiang Zhang; Karen M. Harmon; et al. (Database J. Biol. Databases Curation, 2021)

Consensus of All Solutions for Intractable Phylogenetic Tree Inference. - Pawel Tabaszewski; Pawel Górecki 001; Alexey Markin; Tavis K. Anderson; Oliver Eulenstein (IEEE ACM Trans. Comput. Biol. Bioinform., 2021)

RF-Net 2: fast inference of virus reassortment and hybridization networks. - Alexey Markin; Sanket Wagle; Tavis K. Anderson; Oliver Eulenstein (Bioinform., 2022)

smot: a python package and CLI tool for contextual phylogenetic subsampling. - Zebulun W. Arendsee; Amy L. Vincent Baker; Tavis K. Anderson (J. Open Source Softw., 2022)

The Asymmetric Cluster Affinity Cost. - Sanket Wagle; Alexey Markin; Pawel Górecki 001; Tavis K. Anderson; Oliver Eulenstein (RECOMB-CG, 2023)

Phylogenetic diversity statistics for all clades in a phylogeny. - Siddhant Grover; Alexey Markin; Tavis K. Anderson; Oliver Eulenstein (Bioinform., 2023)

Asymmetric Cluster-Based Measures for Comparative Phylogenetics. - Sanket Wagle; Alexey Markin; Pawel Górecki 001; Tavis K. Anderson; Oliver Eulenstein (J. Comput. Biol., 2024)

Phylo-rs: an extensible phylogenetic analysis library in rust. - Sriram Vijendran; Tavis K. Anderson; Alexey Markin; Oliver Eulenstein (BMC Bioinform., 2025)