CINS: Cell Interaction Network inference from Single cell expression data. - Ye Yuan; Carlos Cosme; Taylor Sterling Adams; Jonas Schupp; Koji Sakamoto; Nikos Xylourgidis; Matthew Ruffalo; Jiachen Li; Naftali Kaminski; Ziv Bar-Joseph (PLoS Comput. Biol., 2022)

iDESC: identifying differential expression in single-cell RNA sequencing data with multiple subjects. - Yunqing Liu; Jiayi Zhao; Taylor Sterling Adams; Ningya Wang; Jonas Schupp; Weimiao Wu; John E. McDonough; Geoffrey Lowell Chupp; Naftali Kaminski; Zuoheng Wang; Xiting Yan (BMC Bioinform., 2023)

Correction: iDESC: identifying differential expression in single-cell RNA sequencing data with multiple subjects. - Yunqing Liu; Jiayi Zhao; Taylor Sterling Adams; Ningya Wang; Jonas Schupp; Weimiao Wu; John E. McDonough; Geoffrey Lowell Chupp; Naftali Kaminski; Zuoheng Wang; Xiting Yan (BMC Bioinform., 2023)

Predicting lung aging using scRNA-Seq data. - Qi Song; Alex Singh; John E. McDonough; Taylor Sterling Adams; Robin Vos; Ruben De Man; Greg Myers; Laurens J. Ceulemans; Bart M. Vanaudenaerde; Wim A. Wuyts; Xiting Yan; Jonas Schupp; et al. (PLoS Comput. Biol., 2024)