PhyloJIVE: Integrating biodiversity data with the Tree of Life. - Garry Jolley-Rogers; Temi Varghese; Paul Harvey; Nick dos Remedios; Joseph T. Miller (Bioinform., 2014)

OfftargetFinder: a web tool for species-specific RNAi design. - Robert T. Good; Temi Varghese; John Golz; Derek A. Russell; Alexie Papanicolaou; Owain Edwards; Charles Robin (Bioinform., 2016)

Phylolink: phylogenetically-based profiling, visualisations and metrics for biodiversity. - Joseph T. Miller; Rebecca Pirzl; Dan Rosauer; Garry Jolley-Rogers; Temi Varghese (Bioinform., 2019)