Prediction of Membrane Protein Interaction Based on Deep Residual Learning. - Tengsheng Jiang; Hongjie Wu; Yuhui Chen; Haiou Li; Jin Qiu; Weizhong Lu; Qiming Fu 001 (ICIC (2), 2020)

DNA-Binding Protein Prediction Based on Deep Learning Feature Fusion. - Shixuan Guan; Tengsheng Jiang; Weizhong Lu; Qiming Fu 001; Haiou Li; Hongjie Wu (ICIC (3), 2021)

Drug-Target Interaction Prediction Based on Transformer. - Junkai Liu; Tengsheng Jiang; Yaoyao Lu; Hongjie Wu (ICIC (2), 2022)

Protein-Ligand Binding Affinity Prediction Based on Deep Learning. - Yaoyao Lu; Junkai Liu; Tengsheng Jiang; Shixuan Guan; Hongjie Wu (ICIC (2), 2022)

G Protein-Coupled Receptor Interaction Prediction Based on Deep Transfer Learning. - Tengsheng Jiang; Yuhui Chen; Shixuan Guan; Zhongtian Hu; Weizhong Lu; Qiming Fu 001; Yijie Ding; Haiou Li; Hongjie Wu (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

Deep Learning-Based Prediction of Drug-Target Binding Affinities by Incorporating Local Structure of Protein. - Runhua Zhang; Baozhong Zhu; Tengsheng Jiang; Zhiming Cui; Hongjie Wu (ICIC (3), 2023)

A Transformer-Based Deep Learning Approach with Multi-layer Feature Processing for Accurate Prediction of Protein-DNA Binding Residues. - Haipeng Zhao; Baozhong Zhu; Tengsheng Jiang; Zhiming Cui; Hongjie Wu (ICIC (3), 2023)

Drug-Target Interaction Prediction Based on Interpretable Graph Transformer Model. - Baozhong Zhu; Runhua Zhang; Tengsheng Jiang; Zhiming Cui; Hongjie Wu (ICIC (3), 2023)

MV-H-RKM: A Multiple View-Based Hypergraph Regularized Restricted Kernel Machine for Predicting DNA-Binding Proteins. - Shixuan Guan; Yuqing Qian; Tengsheng Jiang; Min Jiang 009; Yijie Ding; Hongjie Wu (IEEE ACM Trans. Comput. Biol. Bioinform., 2023)

DNA protein binding recognition based on lifelong learning. - Yongsan Liu; Shixuan Guan; Tengsheng Jiang; Qiming Fu 001; Jieming Ma; Zhiming Cui; Yijie Ding; Hongjie Wu (Comput. Biol. Medicine, 2023)

AttentionMGT-DTA: A multi-modal drug-target affinity prediction using graph transformer and attention mechanism. - Hongjie Wu; Junkai Liu; Tengsheng Jiang; Quan Zou 001; Shujie Qi; Zhiming Cui; Prayag Tiwari; Yijie Ding (Neural Networks, 2024)

Improving drug-target interaction prediction through dual-modality fusion with InteractNet. - Baozhong Zhu; Runhua Zhang; Tengsheng Jiang; Zhiming Cui; Jing Chen 036; Hongjie Wu (J. Bioinform. Comput. Biol., 2024)

TrGPCR: GPCR-Ligand Binding Affinity Prediction Based on Dynamic Deep Transfer Learning. - Yaoyao Lu; Runhua Zhang; Tengsheng Jiang; Qiming Fu 001; Zhiming Cui; Hongjie Wu (IEEE J. Biomed. Health Informatics, 2025)