The K-mer File Format: a standardized and compact disk representation of sets of k-mers. - Yoann Dufresne; Téo Lemane; Pierre Marijon; Pierre Peterlongo; Amatur Rahman; Marek Kokot; Paul Medvedev; Sebastian Deorowicz; Rayan Chikhi (Bioinform., 2022)

Indexing and analysis of large sequencing collections using kmer matrices. (Indexation et analyse de grandes collections de séquençages via des matrices de k-mers). - Téo Lemane (2022)

k mdiff, large-scale and user-friendly differential k-mer analyses. - Téo Lemane; Rayan Chikhi; Pierre Peterlongo (Bioinform., 2022)

Indexing and real-time user-friendly queries in terabyte-sized complex genomic datasets with kmindex and ORA. - Téo Lemane; Nolan Lezzoche; Julien Lecubin; Eric Pelletier; Magali Lescot; Rayan Chikhi; Pierre Peterlongo (Nat. Comput. Sci., 2024)