Gene Ontology Signatures for Immune Cell-Types Inferred by Gene Expression Analysis. - Terrence F. Meehan; Christopher J. Mungall; Judith A. Blake; Alexander D. Diehl (ICBO, 2011)

Revising the Cell Ontology. - Terrence F. Meehan; Christopher J. Mungall; Alexander D. Diehl (ICBO, 2011)

Modularization for the Cell Ontology. - Christopher J. Mungall; Melissa A. Haendel; Amelia Ireland; Shahid Manzoor; Terry Meehan; David Osumi-Sutherland; Carlo Torniai; Alexander D. Diehl (ICBO, 2011)

Cell Line Ontology: Redesigning the Cell Line Knowledgebase to Aid Integrative Translational Informatics. - Sirarat Sarntivijai; Zuoshuang Xiang; Terrence F. Meehan; Alexander D. Diehl; Uma Vempati; Stephan C. Schürer; Chao Pang; James Malone; Helen E. Parkinson; Brian D. Athey; Yongqun He (ICBO, 2011)

Logical Development of the Cell Ontology. - Terrence F. Meehan; Anna Maria Masci; Amina Abdulla; Lindsay G. Cowell; Judith A. Blake; Christopher J. Mungall; Alexander D. Diehl (BMC Bioinform., 2011)

Hematopoietic cell types: Prototype for a revised cell ontology. - Alexander D. Diehl; Alison Deckhut Augustine; Judith A. Blake; Lindsay G. Cowell; Elizabeth S. Gold; Timothy A. Gondré-Lewis; Anna Maria Masci; Terrence F. Meehan; Penelope A. Morel; Anastasia Nijnik; Bjoern Peters; Bali Pulendran; et al. (J. Biomed. Informatics, 2011)

Autism candidate genes via mouse phenomics. - Terrence F. Meehan; Christopher J. Carr; Jeremy J. Jay; Carol J. Bult; Elissa J. Chesler; Judith A. Blake (J. Biomed. Informatics, 2011)

Ontology based molecular signatures for immune cell types via gene expression analysis. - Terrence F. Meehan; Nicole A. Vasilevsky; Christopher J. Mungall; David S. Dougall; Melissa A. Haendel; Judith A. Blake; Alexander D. Diehl (BMC Bioinform., 2013)

CLO: The cell line ontology. - Sirarat Sarntivijai; Yu Lin; Zuoshuang Xiang; Terrence F. Meehan; Alexander D. Diehl; Uma D. Vempati; Stephan C. Schürer; Chao Pang; James Malone; Helen E. Parkinson; Yue Liu; Terue Takatsuki; et al. (J. Biomed. Semant., 2014)

The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. - Gautier Koscielny; Gagarine Yaikhom; Vivek Iyer; Terrence F. Meehan; Hugh Morgan; Julian Atienza-Herrero; Andrew Blake 003; Chao-Kung Chen; Richard Easty; Armida Di Fenza; Tanja Fiegel; Mark Grifiths; et al. (Nucleic Acids Res., 2014)

A promoter-level mammalian expression atlas. - Fantom Consortium; RIKEN PMII; RIKEN CLST (DGT); Alistair R. R. Forrest; Hideya Kawaji; Michael Rehli; J. Kenneth Baillie; Michiel J. L. de Hoon; Vanja Haberle; Timo Lassmann; Ivan V. Kulakovskiy; Marina Lizio; et al. (Nat., 2014)

The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability. - Alexander D. Diehl; Terrence F. Meehan; Yvonne M. Bradford; Matthew H. Brush; Wasila M. Dahdul; David S. Dougall; Yongqun He; David Osumi-Sutherland; Alan Ruttenberg; Sirarat Sarntivijai; Ceri E. Van Slyke; Nicole A. Vasilevsky; et al. (J. Biomed. Semant., 2016)

Reporting phenotypes in mouse models when considering body size as a potential confounder. - Anika Oellrich; Terrence F. Meehan; Helen E. Parkinson; Sirarat Sarntivijai; Jacqueline K. White; Natasha A. Karp (J. Biomed. Semant., 2016)

PDX Finder: A portal for patient-derived tumor xenograft model discovery. - Nathalie Conte; Jeremy C. Mason; Csaba Halmagyi; Steven B. Neuhauser; Abayomi Mosaku; Galabina Yordanova; Aikaterini Chatzipli; Dale A. Begley; Debra M. Krupke; Helen E. Parkinson; Terrence F. Meehan; Carol C. Bult (Nucleic Acids Res., 2019)

Investigating Sex Related Phenotype Changes in Knockout Mice by Applying Deep Learning to X-Ray Images. - Kola Babalola; Hamed Haseli Mashhadi; Violeta Muñoz-Fuentes; Jeremy C. Mason; Terry Meehan (MIUA, 2020)

Soft windowing application to improve analysis of high-throughput phenotyping data. - Hamed Haselimashhadi; Jeremy C. Mason; Violeta Muñoz-Fuentes; Federico López-Gómez; Kolawole O. Babalola; Elif F. Acar; Vivek Kumar; Jacqui White; Ann M. Flenniken; Ruairidh King; Ewan Straiton; John Richard Seavitt; et al. (Bioinform., 2020)

Ten simple rules for annotating sequencing experiments. - Irene Stevens; Abdul Kadir Mukarram; Matthias Hörtenhuber; Terrence F. Meehan; Johan Rung; Carsten O. Daub (PLoS Comput. Biol., 2020)