Protein motif recognition in DNA sequences containing indel errors. - Darrell Conklin; Terry Farrah (German Conference on Bioinformatics, 1998)

ProbAnnoWeb and ProbAnnoPy: probabilistic annotation and gap-filling of metabolic reconstructions. - Brendan King; Terry Farrah; Matthew A. Richards; Michael B. Mundy; Evangelos Simeonidis; Nathan D. Price 001 (Bioinform., 2018)