Predictive and preventive models for diabetes prevention using clinical information in electronic health record. - Ni Cao; Sisi Zeng; Feixia Shen; Chuandi Pan; Chengshui Chen; Thanh Nguyen 005; Jake Yue Chen (BIBM, 2015)

PAGER: constructing PAGs and new PAG-PAG relationships for network biology. - Zongliang Yue; Madhura M. Kshirsagar; Thanh Nguyen 005; Chayaporn Suphavilai; Michael T. Neylon; Liugen Zhu; Timothy Ratliff; Jake Yue Chen (Bioinform., 2015)

DMAP: a connectivity map database to enable identification of novel drug repositioning candidates. - Hui Huang 007; Thanh Nguyen 005; Sara Ibrahim; Sandeep Shantharam; Zongliang Yue; Jake Y. Chen (BMC Bioinform., 2015)

Towards constructing "Super Gene Sets" regulatory networks. - Jake Y. Chen; Zongliang Yue; Michael T. Neylon; Thanh Nguyen 005; Nafisa Bulsara; Itika Arora; Timothy Ratliff (BIBM, 2016)

Identification and optimal control of large-scale systems using selective decentralization. - Thanh Nguyen 005; Snehasis Mukhopadhyay (SMC, 2016)

Multidisciplinary Optimization in Decentralized Reinforcement Learning. - Thanh Nguyen 005; Snehasis Mukhopadhyay (ICMLA, 2017)

Selectively decentralized Q-learning. - Thanh Nguyen 005; Snehasis Mukhopadhyay (SMC, 2017)

Two-phase selective decentralization to improve reinforcement learning systems with MDP. - Thanh Nguyen 005; Snehasis Mukhopadhyay (AI Commun., 2018)

"Super Gene Set" Causal Relationship Discovery from Functional Genomics Data. - Zongliang Yue; Michael T. Neylon; Thanh Nguyen 005; Timothy Ratliff; Jake Y. Chen (IEEE ACM Trans. Comput. Biol. Bioinform., 2018)

Why the 'selfish' optimizing agents could solve the decentralized reinforcement learning problems. - Thanh Nguyen 005; Snehasis Mukhopadhyay; Meghna Babbar-Sebens (AI Commun., 2019)

WIPER: Weighted in-Path Edge Ranking for biomolecular association networks. - Zongliang Yue; Thanh Nguyen 005; Eric Zhang; Jianyi Zhang; Jake Y. Chen (Quant. Biol., 2019)

Cisplatin's potential for type 2 diabetes repositioning by inhibiting CDKN1A, FAS, and SESN1. - Syed Aun Muhammad; Syeda Tahira Qousain Naqvi; Thanh Minh Nguyen 002; Xiaogang Wu; Fahad Munir; Muhammad Babar Jamshed; QiYu Zhang (Comput. Biol. Medicine, 2021)

Statistical Enrichment Analysis of Samples: A General-Purpose Tool to Annotate Metadata Neighborhoods of Biological Samples. - Thanh Nguyen 005; Samuel Bharti; Zongliang Yue; Christopher D. Willey; Jake Y. Chen (Frontiers Big Data, 2021)

Corrigendum: Statistical Enrichment Analysis of Samples: A General-Purpose Tool to Annotate Metadata Neighborhoods of Biological Samples. - Thanh Nguyen 005; Samuel Bharti; Zongliang Yue; Christopher D. Willey; Jake Y. Chen (Frontiers Big Data, 2021)

Polar Gini Curve: A Technique to Discover Gene Expression Spatial Patterns from Single-cell RNA-seq Data. - Thanh Minh Nguyen 002; Jacob John Jeevan; Nuo Xu; Jake Y. Chen (Genom. Proteom. Bioinform., 2021)

Linking clinotypes to phenotypes and genotypes from laboratory test results in comprehensive physical exams. - Thanh Nguyen 005; Tongbin Zhang; Geoffrey Fox; Sisi Zeng; Ni Cao; Chuandi Pan; Jake Y. Chen (BMC Medical Informatics Decis. Mak., 2021)

WINNER: A network biology tool for biomolecular characterization and prioritization. - Thanh Nguyen 005; Zongliang Yue; Radomir Slominski; Robert S. Welner; Jianyi Zhang; Jake Y. Chen (Frontiers Big Data, 2022)