Effective Subject Representation based on Multi-omics Disease Networks using Graph Embedding. - Sundous Hussein; Thao Vu; Leslie Lange; Russell Bowler; Katerina J. Kechris; Farnoush Banaei Kashani (BIBM, 2022)

SPF: A spatial and functional data analytic approach to cell imaging data. - Thao Vu; Julia Wrobel; Benjamin G. Bitler; Erin L. Schenk; Kimberly R. Jordan; Debashis Ghosh (PLoS Comput. Biol., 2022)

FunSpace: A functional and spatial analytic approach to cell imaging data using entropy measures. - Thao Vu; Souvik Seal; Tusharkanti Ghosh; Mansooreh Ahmadian; Julia Wrobel; Debashis Ghosh (PLoS Comput. Biol., 2023)

NetSHy: network summarization via a hybrid approach leveraging topological properties. - Thao Vu; Elizabeth Litkowski; Weixuan Liu; Katherine A. Pratte; Leslie Lange; Russell Bowler; Farnoush Banaei Kashani; Katerina J. Kechris (Bioinform., 2023)

Smccnet 2.0: a comprehensive tool for multi-omics network inference with shiny visualization. - Weixuan Liu; Thao Vu; Iain R. Konigsberg; Katherine A. Pratte; Yonghua Zhuang; Katerina J. Kechris (BMC Bioinform., 2024)