Context Aware 3D CNNs for Brain Tumor Segmentation. - Siddhartha Chandra; Maria Vakalopoulou; Lucas Fidon; Enzo Battistella; Théo Estienne; Roger Sun; Charlotte Robert; Eric Deutsch; Nikos Paragios (BrainLes@MICCAI (2), 2018)

Gene Expression High-Dimensional Clustering Towards a Novel, Robust, Clinically Relevant and Highly Compact Cancer Signature. - Enzo Battistella; Maria Vakalopoulou; Théo Estienne; Marvin Lerousseau; Roger Sun; Charlotte Robert; Nikos Paragios; Eric Deutsch (IWBBIO (1), 2019)

U-ReSNet: Ultimate Coupling of Registration and Segmentation with Deep Nets. - Théo Estienne; Maria Vakalopoulou; Stergios Christodoulidis; Enzo Battistella; Marvin Lerousseau; Alexandre Carre; Guillaume Klausner; Roger Sun; Charlotte Robert; Stavroula G. Mougiakakou; Nikos Paragios; Eric Deutsch (MICCAI (3), 2019)

Brain Tumor Segmentation with Self-ensembled, Deeply-Supervised 3D U-Net Neural Networks: A BraTS 2020 Challenge Solution. - Théophraste Henry; Alexandre Carré; Marvin Lerousseau; Théo Estienne; Charlotte Robert; Nikos Paragios; Eric Deutsch (BrainLes@MICCAI (1), 2020)

Deep Learning Based Registration Using Spatial Gradients and Noisy Segmentation Labels. - Théo Estienne; Maria Vakalopoulou; Enzo Battistella; Alexandre Carré; Théophraste Henry; Marvin Lerousseau; Charlotte Robert; Nikos Paragios; Eric Deutsch (MICCAI (Challenges), 2020)

Weakly Supervised Multiple Instance Learning Histopathological Tumor Segmentation. - Marvin Lerousseau; Maria Vakalopoulou; Marion Classe; Julien Adam; Enzo Battistella; Alexandre Carré; Théo Estienne; Théophraste Henry; Eric Deutsch; Nikos Paragios (MICCAI (5), 2020)

Deep Learning-Based Concurrent Brain Registration and Tumor Segmentation. - Théo Estienne; Marvin Lerousseau; Maria Vakalopoulou; Emilie Alvarez Andres; Enzo Battistella; Alexandre Carré; Siddhartha Chandra; Stergios Christodoulidis; Mihir Sahasrabudhe; Roger Sun; Charlotte Robert; Hugues Talbot; et al. (Frontiers Comput. Neurosci., 2020)

Magnetic Resonance Imaging Virtual Histopathology from Weakly Paired Data. - Amaury Leroy; Kumar Shreshtha; Marvin Lerousseau; Théophraste Henry; Théo Estienne; Marion Classe; Nikos Paragios; Vincent Grégoire; Eric Deutsch (COMPAY@MICCAI, 2021)

Exploring Deep Registration Latent Spaces. - Théo Estienne; Maria Vakalopoulou; Stergios Christodoulidis; Enzo Battistella; Théophraste Henry; Marvin Lerousseau; Amaury Leroy; Guillaume Chassagnon; Marie-Pierre Revel; Nikos Paragios; Eric Deutsch (DART/FAIR@MICCAI, 2021)

Weakly Supervised Pan-Cancer Segmentation Tool. - Marvin Lerousseau; Marion Classe; Enzo Battistella; Théo Estienne; Théophraste Henry; Amaury Leroy; Roger Sun; Maria Vakalopoulou; Jean-Yves Scoazec; Eric Deutsch; Nikos Paragios (MICCAI (8), 2021)

Cancer Gene Profiling through Unsupervised Discovery. - Enzo Battistella; Maria Vakalopoulou; Roger Sun; Théo Estienne; Marvin Lerousseau; Sergey Nikolaev; Emilie Alvarez Andres; Alexandre Carré; Stéphane Niyoteka; Charlotte Robert; Nikos Paragios; Eric Deutsch (CoRR, 2021)

MICS : Multi-steps, Inverse Consistency and Symmetric deep learning registration network. - Théo Estienne; Maria Vakalopoulou; Enzo Battistella; Théophraste Henry; Marvin Lerousseau; Amaury Leroy; Nikos Paragios; Eric Deutsch (CoRR, 2021)

Learn2Reg: comprehensive multi-task medical image registration challenge, dataset and evaluation in the era of deep learning. - Alessa Hering; Lasse Hansen; Tony C. W. Mok; Albert C. S. Chung; Hanna Siebert; Stephanie Häger; Annkristin Lange; Sven Kuckertz; Stefan Heldmann; Wei Shao 008; Sulaiman Vesal; Mirabela Rusu; et al. (CoRR, 2021)

Deep learning-based methods for 3D medical image registration. (Méthodes d'apprentissage profond pour le recalage 3d d'images médicales). - Théo Estienne (2021)

COMBING: Clustering in Oncology for Mathematical and Biological Identification of Novel Gene Signatures. - Enzo Battistella; Maria Vakalopoulou; Roger Sun; Théo Estienne; Marvin Lerousseau; Sergey Nikolaev; Emilie Alvarez Andres; Alexandre Carré; Stéphane Niyoteka; Charlotte Robert; Nikos Paragios; Eric Deutsch (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

Learn2Reg: Comprehensive Multi-Task Medical Image Registration Challenge, Dataset and Evaluation in the Era of Deep Learning. - Alessa Hering; Lasse Hansen; Tony C. W. Mok; Albert C. S. Chung; Hanna Siebert; Stephanie Häger; Annkristin Lange; Sven Kuckertz; Stefan Heldmann; Wei Shao 008; Sulaiman Vesal; Mirabela Rusu; et al. (IEEE Trans. Medical Imaging, 2023)