Zombi: a phylogenetic simulator of trees, genomes and sequences that accounts for dead linages. - Adrián A. Davín; Théo Tricou; Eric Tannier; Damien M. de Vienne; Gergely J. Szöllosi (Bioinform., 2020)

Thirdkind: displaying phylogenetic encounters beyond 2-level reconciliation. - Simon Penel; Hugo Menet; Théo Tricou; Vincent Daubin; Eric Tannier (Bioinform., 2022)