TETRA: a web-service and a stand-alone program for the analysis and comparison of tetranucleotide usage patterns in DNA sequences. - Hanno Teeling; Jost Waldmann; Thierry Lombardot; Margarete Bauer; Frank Oliver Glöckner (BMC Bioinform., 2004)

Megx.net - database resources for marine ecological genomics. - Thierry Lombardot; Renzo Kottmann; Hauke Pfeffer; Michael Richter; Hanno Teeling; Christian Quast; Frank Oliver Glöckner (Nucleic Acids Res., 2006)

MetaLook: a 3D visualisation software for marine ecological genomics. - Thierry Lombardot; Renzo Kottmann; Gregory Giuliani; Andrea de Bono; Nans Addor; Frank Oliver Glöckner (BMC Bioinform., 2007)

MetaMine - A tool to detect and analyse gene patterns in their environmental context. - Uta Bohnebeck; Thierry Lombardot; Renzo Kottmann; Frank Oliver Glöckner (BMC Bioinform., 2008)

JCoast - A biologist-centric software tool for data mining and comparison of prokaryotic (meta)genomes. - Michael Richter; Thierry Lombardot; Ivaylo Kostadinov; Renzo Kottmann; Melissa Beth Duhaime; Jörg Peplies; Frank Oliver Glöckner (BMC Bioinform., 2008)

Updates in Rhea - a manually curated resource of biochemical reactions. - Anne Morgat; Kristian B. Axelsen; Thierry Lombardot; Rafael Alcántara; Lucila Aimo; Mohamed Zerara; Anne Niknejad; Eugeni Belda; Nevila Hyka-Nouspikel; Elisabeth Coudert; Nicole Redaschi; Lydie Bougueleret; et al. (Nucleic Acids Res., 2015)

Updates in Rhea - an expert curated resource of biochemical reactions. - Anne Morgat; Thierry Lombardot; Kristian B. Axelsen; Lucila Aimo; Anne Niknejad; Nevila Hyka-Nouspikel; Elisabeth Coudert; Monica Pozzato; Marco Pagni; Sébastien Moretti; Steven Rosanoff; Joseph Onwubiko; et al. (Nucleic Acids Res., 2017)

Updates in Rhea: SPARQLing biochemical reaction data. - Thierry Lombardot; Anne Morgat; Kristian B. Axelsen; Lucila Aimo; Nevila Hyka-Nouspikel; Anne Niknejad; Alexandr Ignatchenko; Ioannis Xenarios; Elisabeth Coudert; Nicole Redaschi; Alan J. Bridge (Nucleic Acids Res., 2019)

Enzyme annotation in UniProtKB using Rhea. - Anne Morgat; Thierry Lombardot; Elisabeth Coudert; Kristian B. Axelsen; Teresa Batista Neto; Sebastien Gehant; Parit Bansal; Jerven T. Bolleman; Elisabeth Gasteiger; Edouard De Castro; Delphine Baratin; Monica Pozzato; et al. (Bioinform., 2020)

UniProt: the universal protein knowledgebase in 2021. - Alex Bateman; Maria Jesus Martin; Sandra E. Orchard; Michele Magrane; Rahat Agivetova; Shadab Ahmad; Emanuele Alpi; Emily H. Bowler-Barnett; Ramona Britto; Borisas Bursteinas; Hema Bye-A-Jee; Ray Coetzee; et al. (Nucleic Acids Res., 2021)