BPEL-Mora: Lightweight Embeddable Extensible BPEL Engine. - Thilina Gunarathne; Dinesh Premalal; Tharanga Wijethilake; Indika Kumara; Anushka Kumar (WEWST@ECOWS (Final Proceedings), 2006)

Developing a concurrent service orchestration engine in ccr. - Wei Lu; Thilina Gunarathne; Dennis Gannon (IWMSE@ICSE, 2008)

Biomedical Case Studies in Data Intensive Computing. - Geoffrey C. Fox; Xiaohong Qiu; Scott Beason; Jong Youl Choi; Jaliya Ekanayake; Thilina Gunarathne; Mina Rho; Haixu Tang; Neil Devadasan; Gilbert C. Liu (CloudCom, 2009)

DryadLINQ for Scientific Analyses. - Jaliya Ekanayake; Thilina Gunarathne; Geoffrey C. Fox; Atilla Soner Balkir; Christophe Poulain; Nelson Araujo; Roger S. Barga (eScience, 2009)

Application of Management Frameworks to Manage Workflow-Based Systems: A Case Study on a Large Scale E-science Project. - Srinath Perera; Suresh Marru; Thilina Gunarathne; Dennis Gannon; Beth Plale (ICWS, 2009)

Experience with adapting a WS-BPEL runtime for eScience workflows. - Thilina Gunarathne; Chathura Herath; Eran Chinthaka; Suresh Marru (SC-GCE, 2009)

Cloud technologies for bioinformatics applications. - Xiaohong Qiu; Jaliya Ekanayake; Scott Beason; Thilina Gunarathne; Geoffrey C. Fox; Roger S. Barga; Dennis Gannon (SC-MTAGS, 2009)

MapReduce in the Clouds for Science. - Thilina Gunarathne; Tak-Lon Wu; Judy Qiu; Geoffrey C. Fox (CloudCom, 2010)

Twister: a runtime for iterative MapReduce. - Jaliya Ekanayake; Hui Li; Bingjing Zhang; Thilina Gunarathne; Seung-Hee Bae; Judy Qiu; Geoffrey C. Fox (HPDC, 2010)

Cloud computing paradigms for pleasingly parallel biomedical applications. - Thilina Gunarathne; Tak-Lon Wu; Judy Qiu; Geoffrey C. Fox (HPDC, 2010)

Hybrid cloud and cluster computing paradigms for life science applications. - Judy Qiu; Jaliya Ekanayake; Thilina Gunarathne; Jong Youl Choi; Seung-Hee Bae; Hui Li; Bingjing Zhang; Tak-Lon Wu; Yang Ruan; Saliya Ekanayake; Adam Hughes; Geoffrey C. Fox (BMC Bioinform., 2010)

Apache airavata: a framework for distributed applications and computational workflows. - Suresh Marru; Lahiru Gunathilake; Chathura Herath; Patanachai Tangchaisin; Marlon E. Pierce; Chris Mattmann; Raminder Singh; Thilina Gunarathne; Eran Chinthaka; Ross Gardler; Aleksander Slominski; Ate Douma; et al. (SC-GCE, 2011)

Portable Parallel Programming on Cloud and HPC: Scientific Applications of Twister4Azure. - Thilina Gunarathne; Bingjing Zhang; Tak-Lon Wu; Judy Qiu (UCC, 2011)

Cloud computing paradigms for pleasingly parallel biomedical applications. - Thilina Gunarathne; Tak-Lon Wu; Jong Youl Choi; Seung-Hee Bae; Judy Qiu (Concurr. Comput. Pract. Exp., 2011)

Cloud Technologies for Bioinformatics Applications. - Jaliya Ekanayake; Thilina Gunarathne; Judy Qiu (IEEE Trans. Parallel Distributed Syst., 2011)

Scalable parallel computing on clouds using Twister4Azure iterative MapReduce. - Thilina Gunarathne; Bingjing Zhang; Tak-Lon Wu; Judy Qiu (Future Gener. Comput. Syst., 2013)

Iterative statistical kernels on contemporary GPUs. - Thilina Gunarathne; Bimalee Salpitikorala; Arun Chauhan 001; Geoffrey C. Fox (Int. J. Comput. Sci. Eng., 2013)

Towards a Collective Layer in the Big Data Stack. - Thilina Gunarathne; Judy Qiu; Dennis Gannon (CCGRID, 2014)