Exploring Frequented Regions in Pan-Genomic Graphs. - Alan M. Cleary; Indika Kahanda; Brendan Mumey; Joann Mudge; Thiruvarangan Ramaraj (BCB, 2017)

Poster: Pangenome-Wide Association Studies with Frequented Regions. - Buwani Manuweera; Joann Mudge; Indika Kahanda; Brendan Mumey; Thiruvarangan Ramaraj; Alan M. Cleary (BCB, 2019)

Pangenome-Wide Association Studies with Frequented Regions. - Buwani Manuweera; Joann Mudge; Indika Kahanda; Brendan Mumey; Thiruvarangan Ramaraj; Alan M. Cleary (BCB, 2019)

Lung Nodule Malignancy Subtype Discovery with Semantic Learning. - Yiyang Wang 003; Bowen Qiu; Thiruvarangan Ramaraj; Ilyas Ustun; Jacob Furst 001; Daniela Raicu (ICPR, 2022)

Contextualizing Lung Nodule Malignancy Predictions with Easy vs. Hard Image Classification. - Edward Xu; Thiruvarangan Ramaraj; Roselyne Tchoua; Jacob Furst 001; Daniela Raicu (TransAI, 2022)

Genotype-to-Phenotype Associations with Frequented Region Variants. - Indika Kahanda; Buwani Manuweera; Brendan Mumey; Thiruvarangan Ramaraj; Alan M. Cleary; Joann Mudge (BIBM, 2023)

Development of an ontology for biofilms. - Thiruvarangan Ramaraj; Bo Wen Liu; Britney Gibbs; Azalea Mendoza; David L. Millman; Brendan Mumey; Matthew Fields; Callum Bell (BIBM, 2023)

Curriculum gDRO: Improving Lung Malignancy Classification through Robust Curriculum Task Learning. - Arun Sivakumar; Yiyang Wang 003; Roselyne Tchoua; Thiruvarangan Ramaraj; Jacob Furst 001; Daniela Stan Raicu (CBMS, 2023)

Clustering density based gene expression data in the mouse brainstem and comparison to actual neuroanatomy. - Colin Buenvenida; Brandon Kong; Shane Jung; Kaiwen Kam; Jacob D. Furst; Thiruvarangan Ramaraj (CIBCB, 2024)

Application of Machine Learning Techniques to Drive Immunological Insights Towards Malaria Prognosis Using Microarray data. - Sashank Makanaboyina; Zonglin Yang; Rahul Vijay; Thiruvarangan Ramaraj (ICMLA, 2024)

Enhancing Pulmonary Nodule Localization Based on Latent Representations. - Charmi Patel; Yiyang Wang 003; Roselyne Tchoua; Thiruvarangan Ramaraj; Jacob D. Furst; Daniela Raicu (CBMS, 2025)

Video Label Refinement for Temporal Localization. - Jennifer Piane; Thiruvarangan Ramaraj; Jacob D. Furst; Daniela Raicu (ICME, 2025)