Individual-based modeling of soil organic matter in NetLogo: Transparent, user-friendly, and open. - Thomas Banitz; Anna Gras; Marta Ginovart (Environ. Model. Softw., 2015)

Modelling functional resilience of microbial ecosystems: Analysis of governing processes. - Sara König; Anja Worrich; Florian Centler; Lukas Y. Wick; Anja Miltner; Matthias Kästner; Martin Thullner; Karin Frank; Thomas Banitz (Environ. Model. Softw., 2017)

Model-derived causal explanations are inherently constrained by hidden assumptions and context: The example of Baltic cod dynamics. - Thomas Banitz; Maja Schlüter; Emilie B. Lindkvist; Sonja Radosavljevic; Lars-Göran Johansson; Petri Ylikoski; Rodrigo Martínez-Peña; Volker Grimm (Environ. Model. Softw., 2022)

McComedy: A user-friendly tool for next-generation individual-based modeling of microbial consumer-resource systems. - André Bogdanowski; Thomas Banitz; Linea Katharina Muhsal; Christian Kost; Karin Frank (PLoS Comput. Biol., 2022)