SQERTSS: Dynamic rank based throttling of transition probabilities in kinetic Monte Carlo simulations. - Thomas Danielson; Jonathan E. Sutton; Céline Hin; Aditya Savara (Comput. Phys. Commun., 2017)

The F-t-Pj-RG method: An adjacent-rolling-windows based steady-state detection technique for application to kinetic Monte Carlo simulations. - Chris Nellis; Thomas Danielson; Aditya Savara; Céline Hin (Comput. Phys. Commun., 2018)

Automated Framework for Groundwater Monitoring Using DWT with LSTM and Transformers. - Mrunmayee Dhapre; Jehanzeb Khan; Youngsoo Kim; Thomas Danielson; Shrikant Jadhav (CogMI, 2024)

A systematic review of machine learning in groundwater monitoring. - Mrunmayee Dhapre; Shrikant Jadhav; Debanjana Das; Jehanzeb Khan; Youngsoo Kim; Sen Chiao; Thomas Danielson (Environ. Model. Softw., 2025)

Visualizing Temporal Topic Embeddings with a Compass. - Daniel Palamarchuk; Lemara Williams; Brian Mayer; Thomas Danielson; Rebecca Faust; Larry M. Deschaine; Chris North 001 (IEEE Trans. Vis. Comput. Graph., 2025)