Automated Generation of Cognitive Ontology via Web Text-Mining. - Richard Gao; Thomas Donoghue; Bradley Voytek (CogSci, 2017)

Confidence Levels in Scientific Writing: Automated Mining of Primary Literature and Press Releases. - Will Fox; Thomas Donoghue (CogSci, 2018)

NeuroDSP: A package for neural digital signal processing. - Scott Cole; Thomas Donoghue; Richard Gao; Bradley Voytek (J. Open Source Softw., 2019)

LISC: A Python Package for Scientific Literature Collection and Analysis. - Thomas Donoghue (J. Open Source Softw., 2019)

MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis. - Stefan Appelhoff; Matthew Sanderson; Teon L. Brooks; Marijn van Vliet; Romain Quentin; Chris Holdgraf; Maximilien Chaumon; Ezequiel Mikulan; Kambiz Tavabi; Richard Höchenberger; Dominik Welke; Clemens Brunner 001; et al. (Zenodo, 2022)

MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis. - Stefan Appelhoff; Matthew Sanderson; Teon L. Brooks; Marijn van Vliet; Romain Quentin; Chris Holdgraf; Maximilien Chaumon; Ezequiel Mikulan; Kambiz Tavabi; Richard Höchenberger; Dominik Welke; Clemens Brunner 001; et al. (Zenodo, 2022)

MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis. - Stefan Appelhoff; Matthew Sanderson; Teon L. Brooks; Marijn van Vliet; Romain Quentin; Chris Holdgraf; Maximilien Chaumon; Ezequiel Mikulan; Kambiz Tavabi; Richard Höchenberger; Dominik Welke; Clemens Brunner 001; et al. (Zenodo, 2022)

spiketools: a Python package for analyzing single-unit neural activity. - Thomas Donoghue; Sandra Maesta-Pereira; Claire Zhixian Han; Salman Ehtesham Qasim; Joshua Jacobs (J. Open Source Softw., 2023)

MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis. - Stefan Appelhoff; Matthew Sanderson; Teon L. Brooks; Marijn van Vliet; Romain Quentin; Chris Holdgraf; Maximilien Chaumon; Ezequiel Mikulan; Kambiz Tavabi; Richard Höchenberger; Dominik Welke; Clemens Brunner 001; et al. (Zenodo, 2024)

MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis. - Stefan Appelhoff; Matthew Sanderson; Teon L. Brooks; Marijn van Vliet; Romain Quentin; Chris Holdgraf; Maximilien Chaumon; Ezequiel Mikulan; Kambiz Tavabi; Richard Höchenberger; Dominik Welke; Clemens Brunner 001; et al. (Zenodo, 2024)