A parallel algorithm for DNA alignment. - Thomas E. Royce; Rance D. Necaise (ACM Crossroads, 2003)

ExpressYourself: a modular platform for processing and visualizing microarray data - Nicholas M. Luscombe; Thomas E. Royce; Paul Bertone; Nathaniel Echols; Christine E. Horak; Joseph T. Chang; Michael Snyder 001; Mark Gerstein (Nucleic Acids Res., 2003)

Analysis of Genomic Tiling Microarrays for Transcript Mapping and the Identification of Transcription Factor Binding Sites. - Joel S. Rozowsky; Paul Bertone; Thomas E. Royce; Sherman Weissman; Michael Snyder 001; Mark Gerstein (BSB, 2005)

A supervised hidden markov model framework for efficiently segmenting tiling array data in transcriptional and chIP-chip experiments: systematically incorporating validated biological knowledge. - Jiang Du 003; Joel S. Rozowsky; Jan O. Korbel; Zhengdong D. Zhang; Thomas E. Royce; Martin H. Schultz; Michael Snyder 001; Mark Gerstein (Bioinform., 2006)

Assessing the need for sequence-based normalization in tiling microarray experiments. - Thomas E. Royce; Joel S. Rozowsky; Mark Gerstein (Bioinform., 2007)

An efficient pseudomedian filter for tiling microrrays. - Thomas E. Royce; Nicholas Carriero; Mark B. Gerstein (BMC Bioinform., 2007)