Current aspects and future trends of computer-aided rescaffolding. - Karl-Heinz Baringhaus; Gerhard Hessler; Thomas Klabunde (J. Cheminformatics, 2010)

MARS: Computing Three-Dimensional Alignments for Multiple Ligands Using Pairwise Similarities. - Thomas Klabunde; Clemens Giegerich; Andreas Evers (J. Chem. Inf. Model., 2012)

DvD: An R/Cytoscape pipeline for drug repurposing using public repositories of gene expression data. - Clare Pacini; Francesco Iorio; Emanuel J. V. Gonçalves; Murat Iskar; Thomas Klabunde; Peer Bork; Julio Saez-Rodriguez (Bioinform., 2013)

Incorporation of inhaled insulin into the FDA accepted University of Virginia/Padova Type 1 Diabetes Simulator. - Roberto Visentin; Thomas Klabunde; Marshall Grant; Chiara Dalla Man; Claudio Cobelli (EMBC, 2015)

IKAP: A heuristic framework for inference of kinase activities from Phosphoproteomics data. - Marcel Mischnik; Francesca Sacco; Jürgen Cox; Hans-Christoph Schneider; Matthias Schäfer; Manfred Hendlich; Daniel Crowther; Matthias Mann 002; Thomas Klabunde (Bioinform., 2016)

Long-acting Insulin in Diabetes Therapy: In Silico Clinical Trials with the UVA/Padova Type 1 Diabetes Simulator*. - Roberto Visentin; Michele Schiavon; Clemens Giegerich; Thomas Klabunde; Chiara Dalla Man; Claudio Cobelli (EMBC, 2018)

Incorporating Long-Acting Insulin Glargine Into the UVA/Padova Type 1 Diabetes Simulator for In Silico Testing of MDI Therapies. - Roberto Visentin; Michele Schiavon; Clemens Giegerich; Thomas Klabunde; Chiara Dalla Man; Claudio Cobelli (IEEE Trans. Biomed. Eng., 2019)

Modeling Subcutaneous Absorption of Long-Acting Insulin Glargine in Type 1 Diabetes. - Michele Schiavon; Roberto Visentin; Clemens Giegerich; Thomas Klabunde; Claudio Cobelli; Chiara Dalla Man (IEEE Trans. Biomed. Eng., 2020)