The role of dynamic stimulation pattern in the analysis of bistable intracellular networks. - Thomas Millat; Sree N. Sreenath; Radina P. Soebiyanto; Jayant Avva; Kwang-Hyun Cho; Olaf Wolkenhauer (Biosyst., 2008)

Dynamics of receptor and protein transducer homodimerisation. - Julio Vera; Thomas Millat; Walter Kolch; Olaf Wolkenhauer (BMC Syst. Biol., 2008)

A systems biology approach to investigate the effect of pH-induced gene regulation on solvent production by Clostridium acetobutylicum in continuous culture. - Sylvia Haus; Sara Jabbari; Thomas Millat; Holger Janssen; Ralf-Jörg Fischer; Hubert Bahl; John R. King; Olaf Wolkenhauer (BMC Syst. Biol., 2011)

Simulations of stressosome activation emphasize allosteric interactions between RsbR and RsbT. - Ulf W. Liebal; Thomas Millat; Jon Marles-Wright; Richard J. Lewis; Olaf Wolkenhauer (BMC Syst. Biol., 2013)

Gsmodutils: a python based framework for test-driven genome scale metabolic model development. - James P. Gilbert; Nicole Pearcy; Rupert Norman; Thomas Millat; Klaus Winzer; John R. King; Charlie Hodgman; Nigel P. Minton; Jamie Twycross (Bioinform., 2019)

Physicochemical and metabolic constraints for thermodynamics-based stoichiometric modelling under mesophilic growth conditions. - Claudio Tomi-Andrino; Rupert Norman; Thomas Millat; Philippe Soucaille; Klaus Winzer; David A. Barrett; John R. King; Dong-Hyun Kim (PLoS Comput. Biol., 2021)

A genome-scale metabolic model of Cupriavidus necator H16 integrated with TraDIS and transcriptomic data reveals metabolic insights for biotechnological applications. - Nicole Pearcy; Marco Garavaglia; Thomas Millat; James P. Gilbert; Yoseb Song; Hassan Hartman; Craig Woods; Claudio Tomi-Andrino; Rajesh Reddy Bommareddy; Byung-Kwan Cho; David A. Fell; Mark Poolman; et al. (PLoS Comput. Biol., 2022)