A New Role for the University in the Information Age. - Thomas Monaghan (WebNet, 1999)

Roundup: a multi-genome repository of orthologs and evolutionary distances. - Todd F. DeLuca; I-Hsien Wu; Jian Pu; Thomas Monaghan; Leonid Peshkin; Saurav Singh; Dennis P. Wall (Bioinform., 2006)

Collaborative text-annotation resource for disease-centered relation extraction from biomedical text. - Carlos Cano; Thomas Monaghan; Armando Blanco; Dennis P. Wall; Leonid Peshkin (J. Biomed. Informatics, 2009)