The Role of Temporo-parietal Cortex in Subcortical Visual Extinction. - Luca Francesco Ticini; Bianca de Haan; Uwe Klose; Thomas Nägele; Hans-Otto Karnath (J. Cogn. Neurosci., 2010)

Corrigendum to "Visualization, quantification and correlation of brain atrophy with clinical symptoms in spinocerebellar ataxia types 1, 3 and 6" [NeuroImage 49 (2010) 158-168]. - Jörg B. Schulz; Johannes Borkert; Stefanie Wolf; Tanja Schmitz-Hübsch; Maryla Rakowicz; Caterina Mariotti; Ludger Schöls; Dagmar Timmann; Bart van de Warrenburg; Alexandra Dürr; Massimo Pandolfo; Jun-Suk Kang; et al. (NeuroImage, 2010)

Visualization, quantification and correlation of brain atrophy with clinical symptoms in spinocerebellar ataxia types 1, 3 and 6. - Jörg B. Schulz; Johannes Borkert; Stefanie Wolf; Tanja Schmitz-Hübsch; Maryla Rakowicz; Caterina Mariotti; Ludger Schöls; Dagmar Timmann; Bart van de Warrenburg; Alexandra Dürr; Massimo Pandolfo; Jun-Suk Kang; et al. (NeuroImage, 2010)

A systems biology approach to analyse leaf carbohydrate metabolism in Arabidopsis thaliana. - Sebastian Henkel; Thomas Nägele; Imke Hörmiller; Thomas Sauter; Oliver Sawodny; Michael Ederer; Arnd G. Heyer (EURASIP J. Bioinform. Syst. Biol., 2011)

Spectroscopy imaging in intraoperative MR suite: tissue characterization and optimization of tumor resection. - Constantin Roder; Marco Skardelly; Kristofer Fingerle Ramina; Rudi Beschorner; Jürgen Honneger; Thomas Nägele; Marcos Soares Tatagiba; Ulrike Ernemann; Sotirios Bisdas (Int. J. Comput. Assist. Radiol. Surg., 2014)

Approximating the stabilization of cellular metabolism by compartmentalization. - Lisa Fürtauer; Thomas Nägele (Theory Biosci., 2016)

Co-simulation of cyber-physical systems using HLA. - Thomas Nägele; Jozef Hooman (CCWC, 2017)

Rapid Construction of Co-Simulations of Cyber-Physical Systems in HLA Using a DSL. - Thomas Nägele; Jozef Hooman (SEAA, 2017)

Building Distributed Co-Simulations Using CoHLA. - Thomas Nägele; Jozef Hooman; Jack Sleuters (DSD, 2018)

Scalability Analysis of Cloud-Based Distributed Simulations of IoT Systems Using HLA. - Thomas Nägele; Jozef Hooman (ICPADS, 2018)

CoHLA: Design space exploration and co-simulation made easy. - Thomas Nägele; Jozef Hooman; Tim Broenink; Jan F. Broenink (ICPS, 2018)

Magnetic resonance angiography contrast enhancement and combined 3D visualization of cerebral vasculature and white matter pathways. - Hans-Heino Ehricke; Till-Karsten Hauser; Thomas Nägele; Thomas Schult; Uwe Klose (Comput. Medical Imaging Graph., 2018)

Early Analysis of Cyber-Physical Systems using Co-simulation and Multi-level Modelling. - Thomas Nägele; Tim Broenink; Jozef Hooman; Jan F. Broenink (ICPS, 2019)

Utilizing Genetic Programming to Enhance Polygenic Risk Score Calculation. - Martin Hurta; Jana Schwarzerova; Thomas Nägele; Wolfram Weckwerth; Valentine Provazník; Lukás Sekanina (BIBM, 2023)

MInfer: Bridging MetaboAnalyst and Jacobian analysis for metabolomic networks. - Jana Schwarzerova; Erdo Gabor Mate; Jakub Idkowiak; Dominika Olesová; Ales Kvasnicka; Dana Dobesova; David Friedecký; Valentyna Provaznik; Jozef Skarda; Wolfram Weckwerth; Thomas Nägele (Comput. Methods Programs Biomed., 2025)