Modelling Computational Resources for Next Generation Sequencing Bioinformatics Analysis of 16S rRNA Samples. - Matthew J. Wade; Thomas P. Curtis; Russell J. Davenport (CoRR, 2015)

Gaussian process emulation of an individual-based model simulation of microbial communities. - Oluwole K. Oyebamiji; Darren J. Wilkinson; Pahala Gedara Jayathilake; Thomas P. Curtis; S. P. Rushton; Bowen Li 005; P. Gupta (J. Comput. Sci., 2017)

EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies. - Alex L. Mitchell; Maxim Scheremetjew; Hubert Denise; Simon C. Potter; Aleksandra Tarkowska; Matloob Qureshi; Gustavo A. Salazar; Sebastien Pesseat; Miguel A. Boland; Fiona M. I. Hunter; Petra ten Hoopen; Blaise T. F. Alako; et al. (Nucleic Acids Res., 2018)

Bayesian emulation and calibration of an individual-based model of microbial communities. - Oluwole K. Oyebamiji; Darren J. Wilkinson; Bowen Li 005; Pahala Gedara Jayathilake; Paolo Zuliani; Thomas P. Curtis (J. Comput. Sci., 2019)

NUFEB: A massively parallel simulator for individual-based modelling of microbial communities. - Bowen Li 005; Denis Taniguchi; Pahala Gedara Jayathilake; Valentina Gogulancea; Rebeca Gonzalez-Cabaleiro; Jinju Chen; Andrew Stephen McGough; Irina Dana Ofiteru; Thomas P. Curtis; Paolo Zuliani (PLoS Comput. Biol., 2019)

Spatio-temporal Model Checking for 3D Individual-Based Biofilm Simulations. - Bowen Li 005; Pahala Gedara Jayathilake; Yuqing Xia; Thomas P. Curtis; Paolo Zuliani (DataMod, 2021)

A sparse Bayesian hierarchical vector autoregressive model for microbial dynamics in a wastewater treatment plant. - Naomi E. Hannaford; Sarah E. Heaps; Tom M. W. Nye; Thomas P. Curtis; Ben Allen; Andrew Golightly; Darren J. Wilkinson (Comput. Stat. Data Anal., 2023)