Bayesian semi-supervised classification of bacterial samples using MLST databases. - Lu Cheng 004; Thomas R. Connor; David M. Aanensen; Brian G. Spratt; Jukka Corander (BMC Bioinform., 2011)

Influenza classification from short reads with VAPOR facilitates robust mapping pipelines and zoonotic strain detection for routine surveillance applications. - Joel A. Southgate; Matthew J. Bull; Clare M. Brown; Joanne Watkins; Sally Corden; Benjamin Southgate; Catherine Moore; Thomas R. Connor (Bioinform., 2020)