A statistical framework for protein quantitation in bottom-up MS-based proteomics. - Yuliya V. Karpievitch; Jeff Stanley; Thomas Taverner; Jianhua Huang; Joshua N. Adkins; Charles Ansong; Fred Heffron; Thomas O. Metz; Wei-Jun Qian; Hyunjin Yoon; Richard D. Smith; Alan R. Dabney (Bioinform., 2009)

Normalization of peak intensities in bottom-up MS-based proteomics using singular value decomposition. - Yuliya V. Karpievitch; Thomas Taverner; Joshua N. Adkins; Stephen J. Callister; Gordon A. Anderson; Richard D. Smith; Alan R. Dabney (Bioinform., 2009)

DanteR: an extensible R-based tool for quantitative analysis of -omics data. - Thomas Taverner; Yuliya V. Karpievitch; Ashoka D. Polpitiya; Joseph N. Brown; Alan R. Dabney; Gordon A. Anderson; Richard D. Smith (Bioinform., 2012)