Algorithm Engineering for Color-Coding to Facilitate Signaling Pathway Detection. - Falk Hüffner; Sebastian Wernicke 001; Thomas Zichner (APBC, 2007)

FASPAD: fast signaling pathway detection. - Falk Hüffner; Sebastian Wernicke 001; Thomas Zichner (Bioinform., 2007)

Temporal Analysis of Oncogenesis Using MicroRNA Expression Data. - Thomas Zichner; Zelmina Lubovac; Björn Olsson (German Conference on Bioinformatics, 2008)

Algorithm Engineering for Color-Coding with Applications to Signaling Pathway Detection. - Falk Hüffner; Sebastian Wernicke 001; Thomas Zichner (Algorithmica, 2008)

Systematic Inference of Copy-Number Genotypes from Personal Genome Sequencing Data Reveals Extensive Olfactory Receptor Gene Content Diversity. - Sebastian M. Waszak; Yehudit Hasin; Thomas Zichner; Tsviya Olender; Ifat Keydar; Miriam Khen; Adrian M. Stütz; Andreas Schlattl; Doron Lancet; Jan O. Korbel (PLoS Comput. Biol., 2010)

DELLY: structural variant discovery by integrated paired-end and split-read analysis. - Tobias Rausch; Thomas Zichner; Andreas Schlattl; Adrian M. Stütz; Vladimir Benes; Jan O. Korbel (Bioinform., 2012)

Studying the origin and functional impact of genomic sequence variants by next-generation sequencing. - Thomas Zichner (2013)

Taggle: Scalable Visualization of Tabular Data through Aggregation. - Katarína Furmanová; Samuel Gratzl; Holger Stitz; Thomas Zichner; Miroslava Jaresová; Martin Ennemoser; Alexander Lex; Marc Streit (CoRR, 2017)

TourDino: A Support View for Confirming Patterns in Tabular Data. - Klaus Eckelt; Patrick Adelberger; Thomas Zichner; Andreas Wernitznig; Marc Streit (EuroVA@EuroVis, 2019)

Ordino: a visual cancer analysis tool for ranking and exploring genes, cell lines and tissue samples. - Marc Streit; Samuel Gratzl; Holger Stitz; Andreas Wernitznig; Thomas Zichner; Christian Haslinger (Bioinform., 2019)

KnowledgePearls: Provenance-Based Visualization Retrieval. - Holger Stitz; Samuel Gratzl; Harald Piringer; Thomas Zichner; Marc Streit (IEEE Trans. Vis. Comput. Graph., 2019)

Taggle: Combining overview and details in tabular data visualizations. - Katarína Furmanová; Samuel Gratzl; Holger Stitz; Thomas Zichner; Miroslava Jaresová; Alexander Lex; Marc Streit (Inf. Vis., 2020)

Coral: a web-based visual analysis tool for creating and characterizing cohorts. - Patrick Adelberger; Klaus Eckelt; Markus J. Bauer; Marc Streit; Christian Haslinger; Thomas Zichner (Bioinform., 2021)