X-ray Mammography - MRI Registration Using a Volume-Preserving Affine Transformation and an EM-MRF for Breast Tissue Classification. - Thomy Mertzanidou; John H. Hipwell; Manuel Jorge Cardoso; Christine Tanner; Sébastien Ourselin; David J. Hawkes (Digital Mammography / IWDM, 2010)

Combined Reconstruction and Registration of Digital Breast Tomosynthesis. - Guang Yang 006; John H. Hipwell; Matthew J. Clarkson; Christine Tanner; Thomy Mertzanidou; Spencer Gunn; Sébastien Ourselin; David J. Hawkes; Simon R. Arridge (Digital Mammography / IWDM, 2010)

An intensity-based approach to x-ray mammography: MRI registration. - Thomy Mertzanidou; John H. Hipwell; Christine Tanner; David J. Hawkes (Image Processing, 2010)

A hybrid fem-based method for aligning prone and supine images for image guided breast surgery. - Lianghao Han; John H. Hipwell; Thomy Mertzanidou; Timothy J. Carter; Marc Modat; Sébastien Ourselin; David J. Hawkes (ISBI, 2011)

Establishing spatial correspondence for the analysis of images from highly deforming anatomy. - David J. Hawkes; Thomy Mertzanidou; John H. Hipwell; David Atkinson; Holger Roth; Tom Hampshire; Jamie McClelland (EMBC, 2012)

Intensity-Based MRI to X-ray Mammography Registration with an Integrated Fast Biomechanical Transformation. - Thomy Mertzanidou; John H. Hipwell; Lianghao Han; Zeike A. Taylor; Henkjan J. Huisman; Ulrich Bick; Nico Karssemeijer; David J. Hawkes (Digital Mammography / IWDM, 2012)

MRI to X-ray mammography registration using a volume-preserving affine transformation. - Thomy Mertzanidou; John H. Hipwell; Manuel Jorge Cardoso; Xiying Zhang; Christine Tanner; Sébastien Ourselin; Ulrich Bick; Henkjan J. Huisman; Nico Karssemeijer; David J. Hawkes (Medical Image Anal., 2012)

Biomechanically guided prone-to-supine image registration of breast MRI using an estimated reference state. - Björn Eiben; Lianghao Han; John H. Hipwell; Thomy Mertzanidou; Sven Kabus; Thomas Bülow; Cristian Lorenz; Gillian Newstead; Hiroyuki Abe; Mohammed Keshtgar; Sébastien Ourselin; David J. Hawkes (ISBI, 2013)

Towards Spatial Correspondence between Specimen and In-vivo Breast Imaging. - Thomy Mertzanidou; John H. Hipwell; Mehmet Dalmis; Bram Platel; Jeroen van der Laak; Ritse Mann; Nico Karssemeijer; Peter Bult; David J. Hawkes (Digital Mammography / IWDM, 2014)

MRI to X-ray mammography intensity-based registration with simultaneous optimisation of pose and biomechanical transformation parameters. - Thomy Mertzanidou; John H. Hipwell; Stian Flage Johnsen; Lianghao Han; Björn Eiben; Zeike A. Taylor; Sébastien Ourselin; Henkjan J. Huisman; Ritse Mann; Ulrich Bick; Nico Karssemeijer; David J. Hawkes (Medical Image Anal., 2014)

Minimum slice spacing required to reconstruct 3D shape for serial sections of breast tissue for comparison with medical imaging. - Sara Reis; Björn Eiben; Thomy Mertzanidou; John H. Hipwell; Meyke Hermsen; Jeroen van der Laak; Sarah E. Pinder; Peter Bult; David J. Hawkes (Digital Pathology, 2015)

NiftySim: A GPU-based nonlinear finite element package for simulation of soft tissue biomechanics. - Stian Flage Johnsen; Zeike A. Taylor; Matthew J. Clarkson; John H. Hipwell; Marc Modat; Björn Eiben; Lianghao Han; Yipeng Hu; Thomy Mertzanidou; David J. Hawkes; Sébastien Ourselin (Int. J. Comput. Assist. Radiol. Surg., 2015)

Whole Mastectomy Volume Reconstruction from 2D Radiographs and Its Mapping to Histology. - Thomy Mertzanidou; John H. Hipwell; Sara Reis; Babak Ehteshami Bejnordi; Meyke Hermsen; Mehmet Dalmis; Suzan Vreemann; Bram Platel; Jeroen van der Laak; Nico Karssemeijer; Ritse Mann; Peter Bult; et al. (Digital Mammography / IWDM, 2016)

Classification of breast cancer stroma as a tool for prognosis. - Sara Reis; Patrycja Gazinska; John H. Hipwell; Thomy Mertzanidou; Kalnisha Naidoo; Sarah E. Pinder; David J. Hawkes (Digital Pathology, 2016)

A simulation study of spectral Čerenkov luminescence imaging for tumour margin estimation. - Nick Calvert; Yusuf Helo; Thomy Mertzanidou; David S. Tuch; Simon R. Arridge; Danail Stoyanov (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2017)

Automated Classification of Breast Cancer Stroma Maturity From Histological Images. - Sara Reis; Patrycja Gazinska; John H. Hipwell; Thomy Mertzanidou; Kalnisha Naidoo; Norman R. Williams; Sarah E. Pinder; David J. Hawkes (IEEE Trans. Biomed. Eng., 2017)

Tomosynthesis method for depth resolution of beta emitters. - Thomy Mertzanidou; Nick Calvert; David S. Tuch; Danail Stoyanov; Simon R. Arridge (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2019)

Foveation for Segmentation of Mega-Pixel Histology Images. - Chen Jin; Ryutaro Tanno; Moucheng Xu; Thomy Mertzanidou; Daniel C. Alexander (MICCAI (5), 2020)

Foveation for Segmentation of Ultra-High Resolution Images. - Chen Jin; Ryutaro Tanno; Moucheng Xu; Thomy Mertzanidou; Daniel C. Alexander (CoRR, 2020)

Learning to Downsample for Segmentation of Ultra-High Resolution Images. - Chen Jin; Ryutaro Tanno; Thomy Mertzanidou; Eleftheria Panagiotaki; Daniel C. Alexander (ICLR, 2022)