Geometric Analysis of 3D Electron Microscopy Data. - Ullrich Köthe; Björn Andres; Thorben Kröger; Fred A. Hamprecht (WADGMM, 2010)

Runtime-Flexible Multi-dimensional Arrays and Views for C++98 and C++0x - Björn Andres; Ullrich Köthe; Thorben Kröger; Fred A. Hamprecht (CoRR, 2010)

How to Extract the Geometry and Topology from Very Large 3D Segmentations - Björn Andres; Ullrich Köthe; Thorben Kröger; Fred A. Hamprecht (CoRR, 2010)

Globally Optimal Closed-Surface Segmentation for Connectomics. - Björn Andres; Thorben Kröger; Kevin L. Briggman; Winfried Denk; Natalya Korogod; Graham Knott; Ullrich Köthe; Fred A. Hamprecht (ECCV (3), 2012)

3D segmentation of SBFSEM images of neuropil by a graphical model over supervoxel boundaries. - Björn Andres; Ullrich Köthe; Thorben Kröger; Moritz Helmstaedter; Kevin L. Briggman; Winfried Denk; Fred A. Hamprecht (Medical Image Anal., 2012)

Learning to Segment Neurons with Non-local Quality Measures. - Thorben Kröger; Shawn Mikula; Winfried Denk; Ullrich Köthe; Fred A. Hamprecht (MICCAI (2), 2013)

Cut, Glue, & Cut: A Fast, Approximate Solver for Multicut Partitioning. - Thorsten Beier; Thorben Kröger; Jörg H. Kappes; Ullrich Köthe; Fred A. Hamprecht (CVPR, 2014)

Asymmetric Cuts: Joint Image Labeling and Partitioning. - Thorben Kröger; Jörg H. Kappes; Thorsten Beier; Ullrich Köthe; Fred A. Hamprecht (GCPR, 2014)

Automated cell nucleus detection for large-volume electron microscopy of neural tissue. - Faik Boray Tek; Thorben Kröger; Shawn Mikula; Fred A. Hamprecht (ISBI, 2014)

Learning-based Segmentation for Connectomics - Thorben Kröger (2014)

A Comparative Study of Modern Inference Techniques for Structured Discrete Energy Minimization Problems. - Jörg H. Kappes; Björn Andres; Fred A. Hamprecht; Christoph Schnörr; Sebastian Nowozin; Dhruv Batra; Sungwoong Kim; Bernhard X. Kausler; Thorben Kröger; Jan Lellmann; Nikos Komodakis; Bogdan Savchynskyy; et al. (Int. J. Comput. Vis., 2015)

Instance Segmentation of Fibers from Low Resolution CT Scans via 3D Deep Embedding Learning. - Tomasz K. Konopczynski; Thorben Kröger; Lei Zheng; Jürgen Hesser (BMVC, 2018)

Reference Setup for Quantitative Comparison of Segmentation Techniques for Short Glass Fiber CT Data. - Tomasz K. Konopczynski; Jitendra Rathore; Thorben Kröger; Lei Zheng; Christoph S. Garbe; Simone Carmignato; Jürgen Hesser (CoRR, 2019)

Fully Convolutional Deep Network Architectures for Automatic Short Glass Fiber Semantic Segmentation from CT scans. - Tomasz K. Konopczynski; Danish Rathore; Jitendra Rathore; Thorben Kröger; Lei Zheng; Christoph S. Garbe; Simone Carmignato; Jürgen Hesser (CoRR, 2019)

Automated Multiscale 3D Feature Learning for Vessels Segmentation in Thorax CT Images. - Tomasz K. Konopczynski; Thorben Kröger; Lei Zheng; Christoph S. Garbe; Jürgen Hesser (CoRR, 2019)

Defect detection in CT scans of cast aluminum parts: A machine vision perspective. - Patrick Fuchs; Thorben Kröger; Christoph S. Garbe (Neurocomputing, 2021)