A Joint Bayesian Model for Integrating Microarray and RNA Sequencing Transcriptomic Data. - Tianzhou Ma; Faming Liang; Steffi Oesterreich; George C. Tseng (J. Comput. Biol., 2017)

Bayesian integrative model for multi-omics data with missingness. - Zhou Fang; Tianzhou Ma; Gong Tang; Li Zhu; Qi Yan 008; Ting Wang 003; Juan C. Celedón; Wei Chen 074; George C. Tseng (Bioinform., 2018)

MetaOmics: analysis pipeline and browser-based software suite for transcriptomic meta-analysis. - Tianzhou Ma; Zhiguang Huo; Anche Kuo; Li Zhu; Zhou Fang; Xiangrui Zeng; Chien-Wei Lin; Silvia Liu; Lin Wang; Peng Liu; Tanbin Rahman; Lun-Ching Chang; et al. (Bioinform., 2019)

A sparse negative binomial mixture model for clustering RNA-seq count data. - Tanbin Rahman; Yujia Li; Tianzhou Ma; Lu Tang 003; George C. Tseng (CoRR, 2019)

Comparing empirical kinship derived heritability for imaging genetics traits in the UK biobank and human connectome project. - Si Gao; Brian Donohue; Kathryn S. Hatch; Shuo Chen; Tianzhou Ma; Yizhou Ma; Mark D. Kvarta; Heather Bruce; Bhim M. Adhikari; Neda Jahanshad; Paul M. Thompson; John Blangero; et al. (NeuroImage, 2021)

A statistical framework for recovering pseudo-dynamic networks from static data. - Chixiang Chen; Biyi Shen; Tianzhou Ma; Ming Wang; Rongling Wu (Bioinform., 2022)

High-dimension to high-dimension screening for detecting genome-wide epigenetic and noncoding RNA regulators of gene expression. - Hongjie Ke; Zhao Ren; Jianfei Qi; Shuo Chen; George C. Tseng; Zhenyao Ye; Tianzhou Ma (Bioinform., 2022)

A Novel Neighborhood Rough Set-Based Feature Selection Method and Its Application to Biomarker Identification of Schizophrenia. - Ying Xing; Peter V. Kochunov; Theo G. M. van Erp; Tianzhou Ma; Vince D. Calhoun; Yuhui Du (IEEE J. Biomed. Health Informatics, 2023)

dCCA: detecting differential covariation patterns between two types of high-throughput omics data. - Hwiyoung Lee; Tianzhou Ma; Hongjie Ke; Zhenyao Ye; Shuo Chen (Briefings Bioinform., 2024)

TIPS: a novel pathway-guided joint model for transcriptome-wide association studies. - Neng Wang; Zhenyao Ye; Tianzhou Ma (Briefings Bioinform., 2024)

Systems approach for congruence and selection of cancer models towards precision medicine. - Jian Zou; Osama Shah; Yu-Chiao Chiu; Tianzhou Ma; Jennifer M. Atkinson; Steffi Oesterreich; Adrian V. Lee; George C. Tseng (PLoS Comput. Biol., 2024)

Graph Canonical Correlation Analysis. - Hongju Park; Shuyang Bai; Zhenyao Ye; Hwiyoung Lee; Tianzhou Ma; Shuo Chen (CoRR, 2025)