3Omics: a web-based systems biology tool for analysis, integration and visualization of human transcriptomic, proteomic and metabolomic data. - Tien-Chueh Kuo; Tze-Feng Tian; Yufeng Jane Tseng (BMC Syst. Biol., 2013)

LipidPedia: a comprehensive lipid knowledgebase. - Tien-Chueh Kuo; Yufeng Jane Tseng (Bioinform., 2018)

Human Breathomics Database. - Tien-Chueh Kuo; Cheng-En Tan; San-Yuan Wang; Olivia A. Lin; Bo-Han Su; Ming-Tsung Hsu; Jessica Lin; Yu-Yen Cheng; Ciao-Sin Chen; Yu-Chieh Yang; Kuo-Hsing Chen; Shu-Wen Lin; et al. (Database J. Biol. Databases Curation, 2020)