Representation of Markush structures: from molecules toward patents. - Szabolcs Csepregi; Nóra Máté; Róbert Wágner; Tamás Csizmazia; Szilárd Dóránt; Erika Bíró; Tim Dudgeon; Ali Baharev; Ferenc Csizmadia (J. Cheminformatics, 2011)

Galaxy workflows for fragment-based virtual screening: a case study on the SARS-CoV-2 main protease. - Simon Bray; Tim Dudgeon; Rachael Skyner; Rolf Backofen; Björn A. Grüning; Frank von Delft (J. Cheminformatics, 2022)

Fragment Merging Using a Graph Database Samples Different Catalogue Space than Similarity Search. - Stephanie Wills; Ruben Sanchez-Garcia; Tim Dudgeon; Stephen D. Roughley; Andy Merritt; Roderick E. Hubbard; James Davidson; Frank von Delft; Charlotte M. Deane (J. Chem. Inf. Model., 2023)