PhyloPat: phylogenetic pattern analysis of eukaryotic genes. - Tim Hulsen; Jacob de Vlieg; Peter M. A. Groenen (BMC Bioinform., 2006)

Testing statistical significance scores of sequence comparison methods with structure similarity. - Tim Hulsen; Jacob de Vlieg; Jack A. M. Leunissen; Peter M. A. Groenen (BMC Bioinform., 2006)

PhyloPat: an updated version of the phylogenetic pattern database contains gene neighborhood. - Tim Hulsen; Peter M. A. Groenen; Jacob de Vlieg; Wynand Alkema (Nucleic Acids Res., 2009)

Identification of new biomarker candidates for glucocorticoid induced insulin resistance using literature mining. - Wilco W. M. Fleuren; Erik J. M. Toonen; Stefan Verhoeven; Raoul Frijters; Tim Hulsen; Ton Rullmann; René C. van Schaik; Jacob de Vlieg; Wynand Alkema (BioData Min., 2013)

The ten commandments of translational research informatics. - Tim Hulsen (Data Sci., 2019)

BioVenn - an R and Python package for the comparison and visualization of biological lists using area-proportional Venn diagrams. - Tim Hulsen (Data Sci., 2021)

The ReIMAGINE Multimodal Warehouse: Using Artificial Intelligence for Accurate Risk Stratification of Prostate Cancer. - Aida Santaolalla; Tim Hulsen; Jenson Davis; Hashim Uddin Ahmed; Caroline M. Moore; Shonit Punwani; Gert Attard; Neil McCartan; Mark Emberton; Anthony Coolen; Mieke Van Hemelrijck (Frontiers Artif. Intell., 2021)

DeepVenn - a web application for the creation of area-proportional Venn diagrams using the deep learning framework Tensorflow.js. - Tim Hulsen (CoRR, 2022)

Editorial: AI in Healthcare: From Data to Intelligence. - Tim Hulsen; Milan Petkovic; Orsolya Edit Varga; Saumya Shekhar Jamuar (Frontiers Artif. Intell., 2022)