NetworkTrail - a web service for identifying and visualizing deregulated subnetworks. - Daniel Stöckel; Oliver Müller 003; Tim Kehl; Andreas Gerasch; Christina Backes; Alexander Rurainski; Andreas Keller; Michael Kaufmann 001; Hans-Peter Lenhof (Bioinform., 2013)

Towards an open online repository of P. polycephalum networks and their corresponding graph representations. - Michael Dirnberger; Tim Kehl; Tim Mehlhorn; Kurt Mehlhorn; Adrian Neumann (BICT, 2015)

NEFI: Network Extraction From Images. - Michael Dirnberger; Adrian Neumann; Tim Kehl (CoRR, 2015)

Multi-omics enrichment analysis using the GeneTrail2 web service. - Daniel Stöckel; Tim Kehl; Patrick Trampert; Lara Schneider; Christina Backes; Nicole Ludwig 001; Andreas Gerasch; Michael Kaufmann 001; Manfred Gessler; Norbert M. Graf; Eckart Meese; Andreas Keller; et al. (Bioinform., 2016)

miRPathDB: a new dictionary on microRNAs and target pathways. - Christina Backes; Tim Kehl; Daniel Stöckel; Tobias Fehlmann; Lara Schneider; Eckart Meese; Hans-Peter Lenhof; Andreas Keller (Nucleic Acids Res., 2017)

RegulatorTrail: a web service for the identification of key transcriptional regulators. - Tim Kehl; Lara Schneider; Florian Schmidt 003; Daniel Stöckel; Nico Gerstner; Christina Backes; Eckart Meese; Andreas Keller; Marcel H. Schulz; Hans-Peter Lenhof (Nucleic Acids Res., 2017)

REGGAE: a novel approach for the identification of key transcriptional regulators. - Tim Kehl; Lara Schneider; Kathrin Kattler; Daniel Stöckel; Jenny Wegert; Nico Gerstner; Nicole Ludwig 001; Ute Distler; Markus Schick; Ulrich Keller; Stefan Tenzer; Manfred Gessler; et al. (Bioinform., 2018)

miRCarta: a central repository for collecting miRNA candidates. - Christina Backes; Tobias Fehlmann; Fabian Kern; Tim Kehl; Hans-Peter Lenhof; Eckart Meese; Andreas Keller (Nucleic Acids Res., 2018)

ClinOmicsTrailbc: a visual analytics tool for breast cancer treatment stratification. - Lara Schneider; Tim Kehl; Kristina Thedinga; Nadja Liddy Grammes; Christina Backes; Christopher Mohr; Benjamin Schubert; Kerstin Lenhof; Nico Gerstner; Andreas Daniel Hartkopf; Markus Wallwiener; Oliver Kohlbacher; et al. (Bioinform., 2019)

GeneTrail 3: advanced high-throughput enrichment analysis. - Nico Gerstner; Tim Kehl; Kerstin Lenhof; Anne Müller; Carolin Mayer; Lea Eckhart; Nadja Liddy Grammes; Caroline Diener; Martin Hart; Oliver Hahn 004; Jörn Walter; Tony Wyss-Coray; et al. (Nucleic Acids Res., 2020)

miRPathDB 2.0: a novel release of the miRNA Pathway Dictionary Database. - Tim Kehl; Fabian Kern; Christina Backes; Tobias Fehlmann; Daniel Stöckel; Eckart Meese; Hans-Peter Lenhof; Andreas Keller (Nucleic Acids Res., 2020)

MERIDA: a novel Boolean logic-based integer linear program for personalized cancer therapy. - Kerstin Lenhof; Nico Gerstner; Tim Kehl; Lea Eckhart; Lara Schneider; Hans-Peter Lenhof (Bioinform., 2021)

miRTargetLink 2.0 - interactive miRNA target gene and target pathway networks. - Fabian Kern; Ernesto Aparicio-Puerta; Yongping Li; Tobias Fehlmann; Tim Kehl; Viktoria Wagner; Kamalika Ray; Nicole Ludwig 001; Hans-Peter Lenhof; Eckart Meese; Andreas Keller (Nucleic Acids Res., 2021)