EDIBLE: experimental design and information calculations in phylogenetics. - Tim Massingham; Nick Goldman (Bioinform., 2000)

Determination and validation of principal gene products. - Michael L. Tress; Jan-Jaap Wesselink; Adam Frankish; Gonzalo López; Nick Goldman; Ari Löytynoja; Tim Massingham; Fabio Pardi; Simon Whelan; Jennifer L. Harrow; Alfonso Valencia (Bioinform., 2008)

Genomic DNA k-mer Spectra: Models and Modalities. - Benny Chor; David Horn 001; Nick Goldman; Yaron Levy; Tim Massingham (RECOMB, 2010)

Ensembl's 10th year. - Paul Flicek; Bronwen L. Aken; Benoît Ballester; Kathryn Beal; Eugene Bragin; Simon Brent; Yuan Chen 007; Peter Clapham; Guy Coates; Susan Fairley; Stephen Fitzgerald; Julio Fernandez-Banet; et al. (Nucleic Acids Res., 2010)

PhyloSim - Monte Carlo simulation of sequence evolution in the R statistical computing environment. - Botond Sipos; Tim Massingham; Gregory E. Jordan; Nick Goldman (BMC Bioinform., 2011)

Error-correcting properties of the SOLiD Exact Call Chemistry. - Tim Massingham; Nick Goldman (BMC Bioinform., 2012)