SynTReN: a generator of synthetic gene expression data for design and analysis of structure learning algorithms. - Tim Van den Bulcke; Koen Van Leemput; Bart Naudts; Piet van Remortel; Hongwu Ma; Alain Verschoren; Bart De Moor; Kathleen Marchal (BMC Bioinform., 2006)

Validating module network learning algorithms using simulated data. - Tom Michoel; Steven Maere; Eric Bonnet; Anagha Joshi; Yvan Saeys; Tim Van den Bulcke; Koenraad Van Leemput; Piet van Remortel; Martin Kuiper; Kathleen Marchal; Yves Van de Peer (BMC Bioinform., 2007)

Exploring the Operational Characteristics of Inference Algorithms for Transcriptional Networks by Means of Synthetic Data. - Koenraad Van Leemput; Tim Van den Bulcke; Thomas Dhollander; Bart De Moor; Kathleen Marchal; Piet van Remortel (Artif. Life, 2008)

Layout and Post-Processing of Transcriptional Modules. - Hong Sun 002; Tim Van den Bulcke; Bart De Moor; Karen Lemmens; Kristof Engelen; Kathleen Marchal (IJCBS, 2009)

ViTraM: visualization of transcriptional modules. - Hong Sun 002; Karen Lemmens; Tim Van den Bulcke; Kristof Engelen; Bart De Moor; Kathleen Marchal (Bioinform., 2009)

Query-based biclustering of gene expression data using Probabilistic Relational Models. - Hui Zhao; Lore Cloots; Tim Van den Bulcke; Yan Wu; Riet De Smet; Valerie Storms; Pieter Meysman; Kristof Engelen; Kathleen Marchal (BMC Bioinform., 2011)

Data mining methods for classification of Medium-Chain Acyl-CoA dehydrogenase deficiency (MCADD) using non-derivatized tandem MS neonatal screening data. - Tim Van den Bulcke; Paul Vanden Broucke; Viviane Van Hoof; Kristien Wouters; Seppe vanden Broucke; Geert Smits; Elke Smits; Sam Proesmans; Toon Van Genechten; François Eyskens (J. Biomed. Informatics, 2011)

Improving SAPS3-based Mortality Risk Prediction for ICU Patients using Random Forest Models: A Single-center Study. - Thanh Hai Dang; Koen Smets; Walter Verbrugghe; Philippe Jorens; Tim Van den Bulcke (AMIA, 2013)

PASTEL: A Semantic Platform for Assisted Clinical Trial Patient Recruitment. - David Damen; Kim Luyckx; Geert Hellebaut; Tim Van den Bulcke (ICHI, 2013)

De-Identification of Clinical Free Text in Dutch with Limited Training Data: A Case Study. - Elyne Scheurwegs; Kim Luyckx; Filip Van der Schueren; Tim Van den Bulcke (RANLP (Medicine and Biology), 2013)

Data integration of structured and unstructured sources for assigning clinical codes to patient stays. - Elyne Scheurwegs; Kim Luyckx; Léon Luyten; Walter Daelemans; Tim Van den Bulcke (J. Am. Medical Informatics Assoc., 2016)