The digitize Package: Extracting Numerical Data from Scatterplots. - Timothée Poisot (R J., 2011)

An a posteriori measure of network modularity. - Timothée Poisot (F1000Research, 2013)

Ten simple rules for digital data storage. - Edmund Hart; Pauline Barmby; David S. LeBauer; François Michonneau; Sarah Mount; Timothée Poisot; Kara H. Woo; Naupaka Zimmerman; Jeffrey W. Hollister (PeerJ Prepr., 2015)

Ten simple rules for digital data storage. - Edmund Hart; Pauline Barmby; David S. LeBauer; François Michonneau; Sarah Mount; Patrick Mulrooney; Timothée Poisot; Kara H. Woo; Naupaka Zimmerman; Jeffrey W. Hollister (PeerJ Prepr., 2016)

Sustainable computational science: the ReScience initiative. - Nicolas P. Rougier; Konrad Hinsen; Frédéric Alexandre; Thomas Arildsen; Lorena A. Barba; Fabien C. Y. Benureau; C. Titus Brown; Pierre de Buyl; Ozan Caglayan; Andrew P. Davison; Marc-André Delsuc; Georgios Detorakis; et al. (PeerJ Comput. Sci., 2017)

Revisiting the Links-Species Scaling Relationship in Food Webs. - Arthur Andrew Meahan MacDonald; Francis Banville; Timothée Poisot (Patterns, 2020)

Mangal.jl and EcologicalNetworks.jl: Two complementary packages for analyzing ecological networks in Julia. - Francis Banville; Steve Vissault; Timothée Poisot (J. Open Source Softw., 2021)

SimpleSDMLayers.jl and GBIF.jl: A Framework for Species Distribution Modeling in Julia. - Gabriel Dansereau; Timothée Poisot (J. Open Source Softw., 2021)

What constrains food webs? A maximum entropy framework for predicting their structure with minimal biases. - Francis Banville; Dominique Gravel; Timothée Poisot (PLoS Comput. Biol., 2023)

Network embedding unveils the hidden interactions in the mammalian virome. - Timothée Poisot; Marie-Andrée Ouellet; Nardus Mollentze; Maxwell J. Farrell; Daniel J. Becker; Liam Brierley; Gregory F. Albery; Rory J. Gibb; Stephanie N. Seifert; Colin J. Carlson (Patterns, 2023)

Ten quick tips to build a Model Life Cycle. - Timothée Poisot; Daniel J. Becker; Cole B. Brookson; Ellie Graeden; Sadie J. Ryan; Gemma Turon; Colin J. Carlson (PLoS Comput. Biol., 2025)