Nonlinear dimension reduction and clustering by Minimum Curvilinearity unfold neuropathic pain and tissue embryological classes. - Carlo Vittorio Cannistraci; Timothy Ravasi; Franco Maria Montevecchi; Trey Ideker; Massimo Alessio (Bioinform., 2010)

Unexpected complexity of the Reef-Building Coral Acropora millepora transcription factor network. - Taewoo Ryu; Charalampos Mavromatis; Till Bayer; Christian R. Voolstra; Timothy Ravasi (BMC Syst. Biol., 2011)

Poster: Observing change in crowded data sets in 3D space - Visualizing gene expression in human tissues. - Marcin Rogowski; Carlo Vittorio Cannistraci; Gregorio Alanis-Lobato; Philip P. Weber; Timothy Ravasi; Jürgen P. Schulze; Daniel Acevedo Feliz (3DUI, 2013)

Minimum curvilinearity to enhance topological prediction of protein interactions by network embedding. - Carlo Vittorio Cannistraci; Gregorio Alanis-Lobato; Timothy Ravasi (Bioinform., 2013)

A promoter-level mammalian expression atlas. - Fantom Consortium; RIKEN PMII; RIKEN CLST (DGT); Alistair R. R. Forrest; Hideya Kawaji; Michael Rehli; J. Kenneth Baillie; Michiel J. L. de Hoon; Vanja Haberle; Timo Lassmann; Ivan V. Kulakovskiy; Marina Lizio; et al. (Nat., 2014)