ABC-SysBio - approximate Bayesian computation in Python with GPU support. - Juliane Liepe; Chris P. Barnes; Erika Cule; Kamil Erguler; Paul D. W. Kirk; Tina Toni; Michael P. H. Stumpf (Bioinform., 2010)

Simulation-based model selection for dynamical systems in systems and population biology. - Tina Toni; Michael P. H. Stumpf (Bioinform., 2010)

From qualitative data to quantitative models: analysis of the phage shock protein stress response in Escherichia coli. - Tina Toni; Goran N. Jovanovic; Maxime Huvet; Martin Buck; Michael P. H. Stumpf (BMC Syst. Biol., 2011)

Combined Model of Intrinsic and Extrinsic Variability for Computational Network Design with Application to Synthetic Biology. - Tina Toni; Bruce Tidor (PLoS Comput. Biol., 2013)

Model Selection in Systems Biology Depends on Experimental Design. - Daniel Silk; Paul D. W. Kirk; Chris P. Barnes; Tina Toni; Michael P. H. Stumpf (PLoS Comput. Biol., 2014)