MiRFinder: an improved approach and software implementation for genome-wide fast microRNA precursor scans. - Ting-Hua Huang; Bin Fan; Max F. Rothschild; Zhi-Liang Hu; Kui Li; Shu-Hong Zhao (BMC Bioinform., 2007)

K-walks: clustering gene-expression data using a K-means clustering algorithm optimised by random walks. - Min Yao; Qinghua Wu; Juan Li; Ting-Hua Huang (Int. J. Data Min. Bioinform., 2016)

GEREDB: Gene expression regulation database curated by mining abstracts from literature. - Ting-Hua Huang; Xiali Huang; Bomei Shi; Min Yao (J. Bioinform. Comput. Biol., 2019)

Min3: Predict microRNA target gene using an improved binding-site representation method and support vector machine. - Ting-Hua Huang; Xiali Huang; Min Yao (J. Bioinform. Comput. Biol., 2019)