An analytical comparison of different formulations of the travelling salesman problem. - Manfred Padberg; Ting-Yi Sung (Math. Program., 1991)

Data Structure for Graph Representations of a Network Having Double Euler Trails. - Ting-Yi Sung; Lih-Hsing Hsu; Jeng-Yan Hwang (IFIP Congress (1), 1992)

Algorithms for Rectilinear Optimal Multicast Tree Problem. - Jan-Ming Ho; Ming-Tat Ko; Tze-Heng Ma; Ting-Yi Sung (ISAAC, 1992)

The most vital edges of matching in a bipartite graph. - Chun-Nan Hung; Lih-Hsing Hsu; Ting-Yi Sung (Networks, 1993)

Transmitting on various network topologies. - Tung-Yang Ho; Lih-Hsing Hsu; Ting-Yi Sung (Networks, 1996)

A response to Volgenant's Addendum on the most vital edges. - Chun-Nan Hung; Lih-Hsing Hsu; Ting-Yi Sung (Networks, 1996)

Routing and Transmitting Problems in de Bruijn Networks. - Zhen Liu; Ting-Yi Sung (IEEE Trans. Computers, 1996)

Projective Torus Networks. - Ting-Yi Sung; Tung-Yang Ho; Lih-Hsing Hsu (COCOON, 1997)

A new shortest path routing algorithm and embedding cycles of crossed cube. - Chien-Ping Chang; Ting-Yi Sung; Lih-Hsing Hsu (ISPAN, 1997)

An analytic symmetrization of max flow-min cut. - Manfred Padberg; Ting-Yi Sung (Discret. Math., 1997)

Faithful 1-Edge Fault Tolerant Graphs. - Shih-Yih Wang; Lih-Hsing Hsu; Ting-Yi Sung (Inf. Process. Lett., 1997)

Extended Tree Contraction for Some parallel Algorithms on Series-Parallel Networks. - Jeng-Jung Wang; Shih-Yih Wang; Lih-Hsing Hsu; Ting-Yi Sung (J. Inf. Sci. Eng., 1997)

Multiple-Edge-Fault Tolerance with Respect to Hypercubes. - Ting-Yi Sung; Men-Yang Lin; Tung-Yang Ho (IEEE Trans. Parallel Distributed Syst., 1997)

A New Family of Optimal 1-Hamiltonian Graphs with Small Diameter. - Jeng-Jung Wang; Ting-Yi Sung; Lih-Hsing Hsu; Men-Yang Lin (COCOON, 1998)

Christmas Tree: A 1-Fault-Tolerant Network for Token Rings. - Chun-Nan Hung; Lih-Hsing Hsu; Ting-Yi Sung (ICPADS, 1998)

Fault Tolerant Token Ring Embedding in Double Loop Networks. - Ting-Yi Sung; Chun-Yuan Lin; Yen-Chu Chuang; Lih-Hsing Hsu (Inf. Process. Lett., 1998)

The Recognition of Double Euler Trails in Series-Parallel Networks. - Tung-Yang Ho; Ting-Yi Sung; Lih-Hsing Hsu; Chang-Hsiung Tsai; Jeng-Yan Hwang (J. Algorithms, 1998)

Christmas Tree: A Versatile 1-Fault-Tolerant Design for Token Rings. - Chun-Nan Hung; Lih-Hsing Hsu; Ting-Yi Sung (Inf. Process. Lett., 1999)

Optimal k-Fault-Tolerant Networks for Token Rings. - Ting-Yi Sung; Tung-Yang Ho; Chien-Ping Chang; Lih-Hsing Hsu (J. Inf. Sci. Eng., 2000)

Optimum Congested Routing Strategy on Twisted Cubes. - Tseng-Kuei Li; Jimmy J. M. Tan; Lih-Hsing Hsu; Ting-Yi Sung (J. Interconnect. Networks, 2000)

Construction schemes for fault-tolerant Hamiltonian graphs. - Jeng-Jung Wang; Chun-Nan Hung; Jimmy J. M. Tan; Lih-Hsing Hsu; Ting-Yi Sung (Networks, 2000)

Edge Congestion and Topological Properties of Crossed Cubes. - Chien-Ping Chang; Ting-Yi Sung; Lih-Hsing Hsu (IEEE Trans. Parallel Distributed Syst., 2000)

On the Isomorphism between Cyclic-Cubes and Wrapped Butterfly Networks. - Chun-Nan Hung; Jeng-Jung Wang; Ting-Yi Sung; Lih-Hsing Hsu (IEEE Trans. Parallel Distributed Syst., 2000)

Changing the Diameter of Graph Products. - Ting-Yi Sung; Jeng-Jung Wang (COCOON, 2001)

The shuffle-cubes and their generalization. - Tseng-Kuei Li; Jimmy J. M. Tan; Lih-Hsing Hsu; Ting-Yi Sung (Inf. Process. Lett., 2001)

A Family of Trivalent 1-Hamiltonia Graphs With Diameter O(log n). - Jeng-Jung Wang; Ting-Yi Sung; Lih-Hsing Hsu (J. Inf. Sci. Eng., 2001)

On the construction of combined k-fault-tolerant Hamiltonian graphs. - Chun-Nan Hung; Lih-Hsing Hsu; Ting-Yi Sung (Networks, 2001)

A New Similarity Measure among Protein Sequences. - Kuen-Pin Wu; Hsin-Nan Lin; Ting-Yi Sung; Wen-Lian Hsu (CSB, 2003)

An Iterative Relaxation Technique for the NMR Backbone Assignment Problem. - Wen-Lian Hsu; Jia-Ming Chang; Wen-Chi Chou; Jun-Bo Chen; Kuen-Pin Wu; Ting-Yi Sung; Chi-Fon Chang; Wen-Jin Wu; Tai-Huang Huang (BIBE, 2004)

A Maximum Entropy Approach to Biomedical Named Entity Recognition. - Yi-Feng Lin; Tzong-Han Tsai; Wen-Chi Chou; Kuen-Pin Wu; Ting-Yi Sung; Wen-Lian Hsu (BIOKDD, 2004)

GANAA Genetic Algorithm for NMR Backbone Resonance Assignment. - Hsin-Nan Lin; Kuen-Pin Wu; Jia-Ming Chang; Ting-Yi Sung; Wen-Lian Hsu (CSB Workshops, 2005)

MassTRAQ: a Fully Automated Tool for iTRAQ-labeled Protein Quantification. - Wen-Ting Lin; Kuen-Pin Wu; Wei-Neng Hung; Yi-Hwa Yian; Yet-Ran Chen; Yu-Ju Chen; Ting-Yi Sung; Wen-Lian Hsu (CSB Workshops, 2005)

Enhance Genomic IR with Term Variation and Expansion: Experience of the IASL Group at Genomic Track 2005. - Tsung-Han Tsai; Chia-Wei Wu; Hsieh-Chuan Hung; Yu-Chun Wang; Ding He; Yi-Feng Lin; Cheng-Wei Lee 001; Ting-Yi Sung; Wen-Lian Hsu (TREC, 2005)

A note on edge fault tolerance with respect to hypercubes. - Tung-Yang Ho; Ting-Yi Sung; Lih-Hsing Hsu (Appl. Math. Lett., 2005)

HYPROSP II-A knowledge-based hybrid method for protein secondary structure prediction based on local prediction confidence. - Hsin-Nan Lin; Jia-Ming Chang; Kuen-Pin Wu; Ting-Yi Sung; Wen-Lian Hsu (Bioinform., 2005)

A Knowledge-Based Approach to Protein Local Structure Prediction. - Ching-Tai Chen; Hsin-Nan Lin; Kuen-Pin Wu; Ting-Yi Sung; Wen-Lian Hsu (APBC, 2006)

BIOSMILE: Adapting Semantic Role Labeling for Biomedical Verbs. - Richard Tzong-Han Tsai; Wen-Chi Chou; Yu-Chun Lin; Cheng-Lung Sung; Wei Ku; Ying-Shan Su; Ting-Yi Sung; Wen-Lian Hsu (BioNLP@NAACL-HLT, 2006)

A Two-stage Classifier for Protein B-turn Prediction Using Support Vector Machines. - Hua-Sheng Chiu; Hsin-Nan Lin; Allan Lo; Ting-Yi Sung; Wen-Lian Hsu (GrC, 2006)

NERBio: using selected word conjunctions, term normalization, and global patterns to improve biomedical named entity recognition. - Richard Tzong-Han Tsai; Cheng-Lung Sung; Hong-Jie Dai; Hsieh-Chuan Hung; Ting-Yi Sung; Wen-Lian Hsu (BMC Bioinform., 2006)

Various criteria in the evaluation of biomedical named entity recognition. - Richard Tzong-Han Tsai; Shih-Hung Wu; Wen-Chi Chou; Yu-Chun Lin; Ding He; Jieh Hsiang; Ting-Yi Sung; Wen-Lian Hsu (BMC Bioinform., 2006)

Integrating linguistic knowledge into a conditional random fieldframework to identify biomedical named entities. - Tzong-Han Tsai; Wen-Chi Chou; Shih-Hung Wu; Ting-Yi Sung; Jieh Hsiang; Wen-Lian Hsu (Expert Syst. Appl., 2006)

Hyplosp: a Knowledge-based Approach to Protein Local Structure Prediction. - Ching-Tai Chen; Hsin-Nan Lin; Ting-Yi Sung; Wen-Lian Hsu (J. Bioinform. Comput. Biol., 2006)

RIBRA - An Error-Tolerant Algorithm for the NMR Backbone Assignment Problem. - Kuen-Pin Wu; Jia-Ming Chang; Jun-Bo Chen; Chi-Fon Chang; Wen-Jin Wu; Tai-Huang Huang; Ting-Yi Sung; Wen-Lian Hsu (J. Comput. Biol., 2006)

Detection of the inferred interaction network in hepatocellular carcinoma from EHCO (Encyclopedia of Hepatocellular Carcinoma genes Online). - Chun-Nan Hsu; Jin-Mei Lai; Chia-Hung Liu; Huei-Hun Tseng; Chih-Yun Lin; Kuan-Ting Lin; Hsu-Hua Yeh; Ting-Yi Sung; Wen-Lian Hsu; Li-Jen Su; Sheng-An Lee; Chang-Han Chen; et al. (BMC Bioinform., 2007)

Protein subcellular localization prediction based on compartment-specific features and structure conservation. - Emily Chia-Yu Su; Hua-Sheng Chiu; Allan Lo; Jenn-Kang Hwang; Ting-Yi Sung; Wen-Lian Hsu (BMC Bioinform., 2007)

BIOSMILE: A semantic role labeling system for biomedical verbs using a maximum-entropy model with automatically generated template features. - Richard Tzong-Han Tsai; Wen-Chi Chou; Ying-Shan Su; Yu-Chun Lin; Cheng-Lung Sung; Hong-Jie Dai; Irene Tzu-Hsuan Yeh; Wei Ku; Ting-Yi Sung; Wen-Lian Hsu (BMC Bioinform., 2007)

The Multi-Q web server for multiplexed protein quantitation. - Chuan-Yih Yu; Yin-Hao Tsui; Yi-Hwa Yian; Ting-Yi Sung; Wen-Lian Hsu (Nucleic Acids Res., 2007)

Predicting RNA-binding sites of proteins using support vector machines and evolutionary information. - Cheng-Wei Cheng; Emily Chia-Yu Su; Jenn-Kang Hwang; Ting-Yi Sung; Wen-Lian Hsu (BMC Bioinform., 2008)

Diameter variability of cycles and tori. - Jeng-Jung Wang; Tung-Yang Ho; Daniela Ferrero; Ting-Yi Sung (Inf. Sci., 2008)

Predicting helix-helix interactions from residue contacts in membrane proteins. - Allan Lo; Yi-Yuan Chiu; Einar Andreas Rødland; Ping-Chiang Lyu; Ting-Yi Sung; Wen-Lian Hsu (Bioinform., 2009)

Protein subcellular localization prediction of eukaryotes using a knowledge-based approach. - Hsin-Nan Lin; Ching-Tai Chen; Ting-Yi Sung; Shinn-Ying Ho; Wen-Lian Hsu (BMC Bioinform., 2009)

MaXIC-Q Web: a fully automated web service using statistical and computational methods for protein quantitation based on stable isotope labeling and LC-MS. - Chih-Chiang Tsou; Yin-Hao Tsui; Yi-Hwa Yian; Yi-Ju Chen; Han-Yin Yang; Chuan-Yih Yu; Ke-Shiuan Lynn; Yu-Ju Chen; Ting-Yi Sung; Wen-Lian Hsu (Nucleic Acids Res., 2009)

Automated Generic Analysis Tools for Protein Quantitation Using Stable Isotope Labeling. - Wen-Lian Hsu; Ting-Yi Sung (Proteome Bioinformatics, 2010)

TMPad: an integrated structural database for helix-packing folds in transmembrane proteins. - Allan Lo; Cheng-Wei Cheng; Yi-Yuan Chiu; Ting-Yi Sung; Wen-Lian Hsu (Nucleic Acids Res., 2011)

Prediction of nuclear proteins using nuclear translocation signals proposed by probabilistic latent semantic indexing. - Emily Chia-Yu Su; Jia-Ming Chang; Cheng-Wei Cheng; Ting-Yi Sung; Wen-Lian Hsu (BMC Bioinform., 2012)

Lipid exposure prediction enhances the inference of rotational angles of transmembrane helices. - Jhih-Siang Lai; Cheng-Wei Cheng; Allan Lo; Ting-Yi Sung; Wen-Lian Hsu (BMC Bioinform., 2013)

Changing the Diameter in a Diagonal Mesh Network. - Jeng-Jung Wang; Tung-Yang Ho; Ting-Yi Sung; Ming-Yi Ju (J. Inf. Sci. Eng., 2013)

MAGIC-web: a platform for untargeted and targeted N-linked glycoprotein identification. - T. Mamie Lih; Wai-Kok Choong; Chen-Chun Chen; Cheng-Wei Cheng; Hsin-Nan Lin; Ching-Tai Chen; Hui-Yin Chang; Wen-Lian Hsu; Ting-Yi Sung (Nucleic Acids Res., 2016)