Ambush hypothesis revisited: Evidences for phylogenetic trends. - Tiratha Raj Singh; Kamal Raj Pardasani (Comput. Biol. Chem., 2009)

In silico Analysis of Evolutionary Patterns in Restriction Endonucleases. - Tiratha Raj Singh; Kamal Raj Pardasani (Silico Biol., 2009)

Computational analysis for functional and evolutionary aspects of BACE-1 and associated Alzheimer's related proteins. - Priya P. Panigrahi; Tiratha Raj Singh (Int. J. Comput. Intell. Stud., 2012)

Linear B cell epitope prediction for epitope vaccine design against meningococcal disease and their computational validations through physicochemical properties. - Sharat Chandra; Tiratha Raj Singh (Netw. Model. Anal. Health Informatics Bioinform., 2012)

Challenges in the miRNA research. - Tiratha Raj Singh; Arun Gupta; Prashanth Suravajhala (Int. J. Bioinform. Res. Appl., 2013)

Tools, resources and databases for SNPs and indels in sequences: a review. - Abhik Seal; Arun Gupta; M. Mahalaxmi; Riju Aykkal; Tiratha Raj Singh; Vadivel Arunachalam (Int. J. Bioinform. Res. Appl., 2014)

HLAB27Pred: SVM-based precise method for predicting HLA-B*2705 binding peptides in antigenic sequences. - Arun Gupta; Sharat Chandra; Tiratha Raj Singh (Netw. Model. Anal. Health Informatics Bioinform., 2014)

Is HNF4A a candidate to study zinc finger protein slug? - Prashanth Suravajhala; Tiratha Raj Singh (Int. J. Bioinform. Res. Appl., 2015)

Analysis for biological network properties of Alzheimer's disease associated gene set by enrichment and topological examinations. - Ashwani Kumar; Tiratha Raj Singh (Int. J. Bioinform. Res. Appl., 2017)

Network-based approach to understand dynamic behaviour of Wnt signaling pathway regulatory elements in colorectal cancer. - Ankita Shukla; Tiratha Raj Singh (Netw. Model. Anal. Health Informatics Bioinform., 2018)

Gene Expression Studies to Identify Significant Genes in AR, MTOR, MAPK Pathways and their Overlapping Regulatory Role in Prostate Cancer. - Nimisha Asati; Abhinav Mishra; Ankita Shukla; Tiratha Raj Singh (J. Integr. Bioinform., 2019)

Gene Duplication and Speciation. - Tiratha Raj Singh; Ankush Bansal (Encyclopedia of Bioinformatics and Computational Biology (3), 2019)

Disease Biomarker Discovery. - Tiratha Raj Singh; Ankita Shukla; Taoufik Bensellak; Ahmed Moussa; Brigitte Vannier (Encyclopedia of Bioinformatics and Computational Biology (3), 2019)

Computational studies to explore the role of MSI associated DNA mismatch repair mechanisms in HNPCC through expression and interaction data. - Sadhika Behl; Arushi Sharma; Prashanth Suravajhala; Tiratha Raj Singh (Int. J. Bioinform. Res. Appl., 2020)

SCAN DB: an integrated catalogue of computationally characterised NER specific skin cancers. - Varsha Mehta; Tanya Singh; Ankush Bansal; Tiratha Raj Singh (Int. J. Bioinform. Res. Appl., 2020)

Early Diagnosis of Alzheimer's Disease using Machine Learning Based Methods. - Muskan Kapoor; Mehak Kapoor; Rohit Shukla; Tiratha Raj Singh (IC3, 2021)

Structural and functional analysis of disease-associated mutations in GOT1 gene: An in silico study. - Sidharth Saxena; Sai Achyuth B; T. P. Krishna Murthy; Vivek Chandramohan; Arvind Kumar Yadav; Tiratha Raj Singh (Comput. Biol. Medicine, 2021)

Structure based inference of functional single nucleotide polymorphism and its role in TGFβ1 allied colorectal cancer (CRC). - Ankita Shukla; Tiratha Raj Singh (Int. J. Bioinform. Res. Appl., 2021)

Identification of small molecules against the NMDAR: an insight from virtual screening, density functional theory, free energy landscape and molecular dynamics simulation-based findings. - Garima Sharma; Rohit Shukla; Tiratha Raj Singh (Netw. Model. Anal. Health Informatics Bioinform., 2022)