Constraint-driven optimization of plant defense model parameters. - Dragana Miljkovic; Matjaz Depolli; Igor Mozetic; Nada Lavrac; Tjasa Stare; Marko Petek; Kristina Gruden (BIBM Workshops, 2012)

Modelling a Biological System: Network Creation by Triplet Extraction from Biological Literature. - Dragana Miljkovic; Vid Podpecan; Miha Grcar; Kristina Gruden; Tjasa Stare; Marko Petek; Igor Mozetic; Nada Lavrac (Bisociative Knowledge Discovery, 2012)

Integrating semantic transcriptomic data analysis and knowledge extraction from biological literature. - Vid Podpecan; Dragana Miljkovic; Marko Petek; Tjasa Stare; Kristina Gruden; Igor Mozetic; Nada Lavrac (BIBM, 2013)

Incremental revision of biological networks from texts. - Dragana Miljkovic; Vid Podpecan; Tjasa Stare; Igor Mozetic; Kristina Gruden; Nada Lavrac (IWBBIO, 2013)

Plant defence model revisions through iterative minimisation of constraint violations. - Dragana Miljkovic; Matjaz Depolli; Tjasa Stare; Igor Mozetic; Marko Petek; Kristina Gruden; Nada Lavrac (Int. J. Comput. Biol. Drug Des., 2014)

Discovery of Relevant Response in Infected Potato Plants from Time Series of Gene Expression Data. - Dragan Gamberger; Tjasa Stare; Dragana Miljkovic; Kristina Gruden; Nada Lavrac (Mach. Learn. Knowl. Extr., 2019)