PyGOLD: a python based API for docking based virtual screening workflow generation. - Hitesh Patel; Tobias Brinkjost; Oliver Koch (Bioinform., 2017)

A novel interaction fingerprint derived from per atom score contributions: exhaustive evaluation of interaction fingerprint performance in docking based virtual screening. - Julia B. Jasper; Lina Humbeck; Tobias Brinkjost; Oliver Koch (J. Cheminformatics, 2018)

A benchmark driven guide to binding site comparison: An exhaustive evaluation using tailor-made data sets (ProSPECCTs). - Christiane Ehrt; Tobias Brinkjost; Oliver Koch (PLoS Comput. Biol., 2018)

Seconds first! - Tobias Brinkjost (2019)

Binding Site Comparison - Software and Applications. - Oliver Koch; Christiane Ehrt; Tobias Brinkjost (Encyclopedia of Bioinformatics and Computational Biology (2), 2019)

SCOT: Rethinking the classification of secondary structure elements. - Tobias Brinkjost; Christiane Ehrt; Oliver Koch; Petra Mutzel (Bioinform., 2020)