GDAP: a web tool for genome-wide protein disulfide bond prediction. - Brian D. O'Connor; Todd O. Yeates (Nucleic Acids Res., 2004)

Detecting coordinated regulation of multi-protein complexes using logic analysis of gene expression. - Einat Sprinzak; Shawn Cokus; Todd O. Yeates; David Eisenberg 001; Matteo Pellegrini (BMC Syst. Biol., 2009)

Accurate design of co-assembling multi-component protein nanomaterials. - Neil P. King; Jacob B. Bale; William Sheffler; Dan E. McNamara; Shane Gonen; Tamir Gonen; Todd O. Yeates; David Baker 001 (Nat., 2014)

Exploring Bacterial Organelle Interactomes: A Model of the Protein-Protein Interaction Network in the Pdu Microcompartment. - Julien Jorda; Yu Liu; Thomas A. Bobik; Todd O. Yeates (PLoS Comput. Biol., 2015)